Releases: RRobert92/ASGA
Releases · RRobert92/ASGA
Automatic Spatial-Graph Analysis (ASGA) v0.37
Automatic Spatial-Graph Analysis (ASGA) v0.36
v0.36 - Published 10/07/2021
Major changes
- Maintenance update to calculate non-KMT ends type
Automatic Spatial-Graph Analysis (ASGA)
Automatic Spatial-Graph Analysis (ASGA) v0.34.1
Published 10/03/2021 Robert Kiewisz
Major changes
- Maintenance update
- Introduced desktop app for Win x64 and Linux x64with electron-packager
Automatic Spatial-Graph Analysis (ASGA)
Automatic Spatial-Graph Analysis (ASGA) v0.34
Published 01/03/2021 Robert Kiewisz
Major changes
- Restructure MT interaction functions
- Improved performance of the calculation
- Added option to run the calculation as a function of distance
- Added export of curvature data into Amira file
- Added function to calculate SMTs minus-end distance
- Restructured Analysis folder and split function for KMTs/SMTs and Stat
- New tool to calculate position and interaction of KMT minus-ends with other MTs
Minor changes
- Added Menger curvature
- Error handler for analyzed data when uploaded
- Added selection for local curvature by user
- Added unified test protocol for all tools
Bug Fix
- Bugfixes for Amira output
Other
- Update library
- small responsiveness improvement of the main page when user upload
the wrong file - Added ASGA documentation
- Added a script generating plots for eLife paper
- Finished ASGA documentation
Automatic Spatial-Graph Analysis (ASGA)
Automatic Spatial-Graph Analysis (ASGA) v0.33
Published 28/12/2020 Robert Kiewisz
Mejor changes
- New tool for MT interaction
- Introduced new file format (.am) for readout and save analysis to read in
Amira ZIB - Update R to 4.0.3 and packages
Minor changes
- Change output in the End_morphology to show the name of the fiber not column no.
Bug Fix
- Bugfix in the button reactivity, replaced all shinyAlert to sweetAlert
- Bugfix in check_Data utility when displaying error type
- Bugfix in fiber_area when using amira file
- Bugfix for upload_data when using amira file
- Bugfix for saving amira and loading amira files
- Bugfix with missing
Amiravariable shown in Test Unit
Other
- Added parallel processing library
- Created R Shiny template v1.0
- Maintenance update and cleaned code
- Remove deprecated as.tibble() from loading amira files
Automatic Spatial-Graph Analysis (ASGA)
v0.32 - Published 30/08/2020
Mejor changes
- Code reviewed and standardized according to the tidyverse guidelines
- Added renv library management
- Added custom test unit
Minor changes
- Added node_id as an output of end_morpology
Bug Fix
- Review entire code (v0.31.1)
Other
- added ASGA logo
Automatic Spatial-Graph Analysis (ASGA)
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v0.31 - Published 09/07/2020
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Mejor changes
- Added upload for the analyzed data for plotting
- Added analysis report page and its responsiveness
- Allows to change names and color of a graphs
- Added tool for length and curvature of a fiber
- Added tool for calculation of a kinetochore area and it's position
Minor changes
- Changed style of the Download button
Bug Fix
- Adjustment in a CSS style for different screen resolutions
Other
- Created ASGA_dev for consol based ASGA used for testing new tools
- Change threshold for the ellipse model
- Added plotting for the Ellipse, plus end and unified model
Automatic Spatial-Graph Analysis (ASGA)
v0.30.1
Mejor changes
- Moved loading of a data from Upload to separate function
- Upload and analysis of multiple data is now supported
- Added module for saving data
- Added module for exporting and downloading data
Minor changes
- Title of an app is now a variable
- Added small progress bar if more then one dataset was upload to indicate which
dataset is currently analyzed
Bug Fix
- Fixed analysis of the end morphology
Other
- Started documentation of changes (a.k.a. Change Log)
Automatic Spatial-Graph Analysis (ASGA)
What's new in V0.3:
- UI & stability improvement
- Added all tools from the local version
- Clean out CSS
- Upload to the Shinyapp.io server
Work in progress: - Export UI
- Standart report output
- SandBox for analyzed data
MT_Length_distribiution
v0.1 bugfix