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fix: bad types for metadata tags
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davidlougheed committed Dec 9, 2024
1 parent 545620e commit 364068c
Showing 1 changed file with 6 additions and 6 deletions.
12 changes: 6 additions & 6 deletions chord_metadata_service/chord/workflows/metadata.py
Original file line number Diff line number Diff line change
Expand Up @@ -53,7 +53,7 @@ def boolean_input(id_: str, required: bool = True):
name="Bento Phenopackets-Compatible JSON",
description="This ingestion workflow will validate and import a Phenopackets schema-compatible JSON document.",
data_type=DATA_TYPE_PHENOPACKET, # for permissions
tags=[DATA_TYPE_PHENOPACKET],
tags=frozenset({DATA_TYPE_PHENOPACKET}),
file="phenopackets_json.wdl",
inputs=[
# injected
Expand All @@ -71,7 +71,7 @@ def boolean_input(id_: str, required: bool = True):
name="Bento Experiments JSON",
description="This ingestion workflow will validate and import a Bento Experiments schema-compatible JSON document.",
data_type=DATA_TYPE_EXPERIMENT, # for permissions
tags=[DATA_TYPE_EXPERIMENT],
tags=frozenset({DATA_TYPE_EXPERIMENT}),
file="experiments_json.wdl",
inputs=[
# injected
Expand All @@ -89,7 +89,7 @@ def boolean_input(id_: str, required: bool = True):
name="Bento Experiments JSON With Files",
description="This workflow ingests experiments and related files into DRS.",
data_type=DATA_TYPE_EXPERIMENT,
tags=[DATA_TYPE_EXPERIMENT, "experiment_result"],
tags=frozenset({DATA_TYPE_EXPERIMENT, "experiment_result"}),
file="experiments_json_with_files.wdl",
inputs=[
# injected
Expand All @@ -111,7 +111,7 @@ def boolean_input(id_: str, required: bool = True):
name="Experiment Results Files",
description="This workflow ingests files into DRS which have been already listed as experiment results.",
data_type=DATA_TYPE_EXPERIMENT, # for permissions
tags=[DATA_TYPE_EXPERIMENT, "experiment_result"],
tags=frozenset({DATA_TYPE_EXPERIMENT, "experiment_result"}),
file="experiment_results_files.wdl",
inputs=[
# injected
Expand All @@ -131,7 +131,7 @@ def boolean_input(id_: str, required: bool = True):
name="Convert VCF to MAF files",
description="This analysis workflow will create MAF files from every VCF file found in a dataset.",
file="vcf2maf.wdl",
tags=[WORKFLOW_TAG_CBIOPORTAL],
tags=frozenset({WORKFLOW_TAG_CBIOPORTAL}),
inputs=[
# injected
ACCESS_TOKEN_INPUT,
Expand All @@ -150,7 +150,7 @@ def boolean_input(id_: str, required: bool = True):
type="export",
name="cBioPortal",
description="This workflow creates a bundle for cBioPortal ingestion.",
tags=[WORKFLOW_TAG_CBIOPORTAL],
tags=frozenset({WORKFLOW_TAG_CBIOPORTAL}),
file="cbioportal_export.wdl",
inputs=[
# injected
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