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BQSR: avoid throwing an error when read group is missing in the recal table, and some refactoring. #4979

BQSR: avoid throwing an error when read group is missing in the recal table, and some refactoring.

BQSR: avoid throwing an error when read group is missing in the recal table, and some refactoring. #4979

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Java 17.0.6+10 test on docker integration

succeeded Jan 14, 2025 in 33m 5s
Set up job
2s
Run actions/checkout@v3
20s
Run /./.github/actions/purge-runner-disk
3s
Set up java 17.0.6+10
12s
Run google-github-actions/auth@v0
0s
export the credentials for GATK tests
0s
Set up Cloud SDK
16s
build test jars
1m 51s
set up test folders and links
0s
Download docker image artifact
1m 22s
Load Docker image
1m 5s
pull lfs files
39s
run-docker-tests
26m 57s
Run /./.github/actions/upload-gatk-test-results
9s
Post Run google-github-actions/auth@v0
0s
Post Set up java 17.0.6+10
0s
Post Run actions/checkout@v3
0s
Complete job
0s