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Adding versioning + auto alembic upgrade + upgrade/downgrade debug fo… #36

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merged 1 commit into from
Sep 10, 2024

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Adding versioning + auto alembic upgrade + upgrade/downgrade debug for latest version

@paulstretenowich paulstretenowich merged commit 477cf5c into dev Sep 10, 2024
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poquirion pushed a commit that referenced this pull request Sep 11, 2024
New schama and instrumentation to update it 

* Renaming organism into specimen

* Adding "state" enum for readset + new Reference table + debug

* Adding INVALID state + considering only VALID readsets to get undelivered

* Adding alembic for when database structure gets updated

* Reorganizing alembic folders and adding url in env.py

* Adding versioning + auto alembic upgrade + upgrade/downgrade debug for latest version (#36)
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