v1.4.0

What's Changed

• Disable overlapping of UTRs with features on other strand by @haessar in #35
  • Additional command line argument --no-strand-overlap which prevents new UTR features being generated that will overlap any feature, regardless of strand. A UTR will be truncated to ensure overlapping doesn't occur.

Full Changelog: v1.3.3...v1.4.0

v1.3.3

What's Changed

• Ensure pre-existing ncRNA are reintegrated into output by @haessar in #34

Full Changelog: v1.3.2...v1.3.3

v1.3.2

What's Changed

• Better parsing of output files and bug fixing by @haessar in #33

Full Changelog: v1.3.1...v1.3.2

v1.3.1

What's Changed

• Use transcript instead of exon in criteria that involve "next gene" by @haessar in #32

Full Changelog: v1.3.0...v1.3.1

v1.3.0

What's Changed

Pseudogene annotation by @haessar in #31

Pseudogenic transcripts will now be annotated with viable 3' UTRs when the --do-pseudo command line option is given.

Full Changelog: v1.2.6...v1.3.0

v1.2.6

Release for Zenodo

Full Changelog: v1.2.5...v1.2.6

v1.2.5

What's Changed

• Improved input file validation by @haessar in #30

Full Changelog: v1.2.4...v1.2.5

v1.2.4

What's Changed

• Validate compatibility of GFF and BAM input files by @haessar in #27

Full Changelog: v1.2.3...v1.2.4

v1.2.3

What's Changed

• macOS compatibility by @haessar in #29

Full Changelog: v1.2.2...v1.2.3

v1.2.2

minor fix

Full Changelog: v1.2.1...v1.2.2