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r1121: updated obsolete settings in manpage
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Resolve #851
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lh3 committed Dec 26, 2021
1 parent 36942ff commit 3bde345
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions minimap2.1
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.TH minimap2 1 "18 November 2021" "minimap2-2.23 (r1111)" "Bioinformatics tools"
.TH minimap2 1 "18 December 2021" "minimap2-2.24 (r1121)" "Bioinformatics tools"
.SH NAME
.PP
minimap2 - mapping and alignment between collections of DNA sequences
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Minimizer k-mer length [15]
.TP
.BI -w \ INT
Minimizer window size [2/3 of k-mer length]. A minimizer is the smallest k-mer
Minimizer window size [10]. A minimizer is the smallest k-mer
in a window of w consecutive k-mers.
.TP
.B -H
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.B sr
Short single-end reads without splicing
.RB ( -k21
.B -w11 --sr --frag=yes -A2 -B8 -O12,32 -E2,1 -b0 -r100 -p.5 -N20 -f1000,5000 -n2 -m20
.B -w11 --sr --frag=yes -A2 -B8 -O12,32 -E2,1 -b0 -r100 -p.5 -N20 -f1000,5000 -n2 -m25
.B -s40 -g100 -2K50m --heap-sort=yes
.BR --secondary=no ).
.TP
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