Isort packages

disdrodb/__init__.py

@@ -1,9 +1,9 @@
-from importlib.metadata import version, PackageNotFoundError
+from importlib.metadata import PackageNotFoundError, version
 
 from disdrodb.api.io import (
-    available_stations,
     available_campaigns,
     available_data_sources,
+    available_stations,
 )
 from disdrodb.api.metadata import read_station_metadata
 from disdrodb.l0.standards import available_sensor_name

disdrodb/api/info.py

@@ -1,8 +1,9 @@
 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 
-import re
 import os
+import re
+
 import numpy as np
 from trollsift import Parser
 

disdrodb/api/io.py

@@ -18,10 +18,11 @@
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 # -----------------------------------------------------------------------------.
 
-import os
 import glob
-import yaml
+import os
+
 import numpy as np
+import yaml
 
 
 def _get_disdrodb_directory(
@@ -31,8 +32,8 @@ def _get_disdrodb_directory(
     campaign_name="",
     check_exist=True,
 ):
-    from disdrodb.l0.io import _check_directory_exist
     from disdrodb.api.checks import check_disdrodb_dir
+    from disdrodb.l0.io import _check_directory_exist
 
     # Check if disdrodb_dir has a valid name
     check_disdrodb_dir(disdrodb_dir)

disdrodb/api/metadata.py

@@ -17,9 +17,11 @@
 # You should have received a copy of the GNU General Public License
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 # -----------------------------------------------------------------------------.
+import glob
 import os
+
 import yaml
-import glob
+
 from disdrodb.api.io import _get_disdrodb_directory
 
 

disdrodb/data_transfer/download_data.py

@@ -1,9 +1,9 @@
 import os
+from typing import List, Optional, Union
+
+import click
 import pooch
 import tqdm
-import click
-
-from typing import Union, Optional, List
 
 from disdrodb.api.metadata import _read_yaml_file, get_list_metadata
 from disdrodb.utils.compression import _unzip_file

disdrodb/data_transfer/upload_data.py

@@ -1,11 +1,11 @@
 import os
-import click
+from typing import List, Optional
 
-from typing import Optional, List
+import click
 
-from disdrodb.api.metadata import _read_yaml_file, get_list_metadata, _write_yaml_file
-from disdrodb.utils.zenodo import _create_zenodo_deposition, _upload_file_to_zenodo
+from disdrodb.api.metadata import _read_yaml_file, _write_yaml_file, get_list_metadata
 from disdrodb.utils.compression import _zip_dir
+from disdrodb.utils.zenodo import _create_zenodo_deposition, _upload_file_to_zenodo
 
 
 def click_upload_option(function: object):

disdrodb/l0/__init__.py

@@ -1,14 +1,14 @@
+from disdrodb.l0.check_metadata import (
+    check_archive_metadata_compliance,
+    check_archive_metadata_geolocation,
+)
 from disdrodb.l0.l0_processing import (
-    run_l0a,
-    run_l0b_from_nc,
     run_disdrodb_l0,
     run_disdrodb_l0_station,
+    run_l0a,
+    run_l0b_from_nc,
 )
 from disdrodb.l0.l0_reader import available_readers
-from disdrodb.l0.check_metadata import (
-    check_archive_metadata_geolocation,
-    check_archive_metadata_compliance,
-)
 
 __all__ = [
     "run_l0a",

disdrodb/l0/check_configs.py

@@ -2,15 +2,14 @@
 # -*- coding: utf-8 -*-
 import glob
 import os
+from typing import List, Optional, Union
 
-from typing import List, Union, Optional
+import numpy as np
 from pydantic import BaseModel, ValidationError, validator
 
-from disdrodb.l0.standards import available_sensor_name
-
-
-import numpy as np
 from disdrodb.l0.standards import (
+    available_sensor_name,
+    get_configs_dir,
     get_diameter_bin_center,
     get_diameter_bin_lower,
     get_diameter_bin_upper,
@@ -19,11 +18,9 @@
     get_velocity_bin_lower,
     get_velocity_bin_upper,
     get_velocity_bin_width,
-    get_configs_dir,
     read_config_yml,
 )
 
-
 CONFIG_FILES_LIST = [
     "bins_diameter.yml",
     "bins_velocity.yml",

disdrodb/l0/check_metadata.py

@@ -2,26 +2,26 @@
 # -*- coding: utf-8 -*-
 
 import os
-import yaml
 from typing import Union
+
+import yaml
+
+from disdrodb.api.metadata import get_list_metadata, read_station_metadata
 from disdrodb.l0.io import (
-    get_disdrodb_dir,
-    get_data_source,
     get_campaign_name,
+    get_data_source,
+    get_disdrodb_dir,
 )
-from disdrodb.api.metadata import read_station_metadata
 from disdrodb.l0.l0_reader import _check_metadata_reader
 from disdrodb.l0.metadata import (
-    _check_metadata_keys,
-    _check_metadata_data_source,
     _check_metadata_campaign_name,
-    _check_metadata_station_name,
+    _check_metadata_data_source,
+    _check_metadata_keys,
     _check_metadata_sensor_name,
+    _check_metadata_station_name,
     check_metadata_compliance,
 )
 
-from disdrodb.api.metadata import get_list_metadata
-
 #### --------------------------------------------------------------------------.
 
 

disdrodb/l0/check_readers.py

@@ -1,12 +1,11 @@
-import os
 import glob
+import os
 import shutil
-import pandas as pd
 
+import pandas as pd
 
-from disdrodb.l0.l0_reader import get_station_reader
 from disdrodb.api.io import _get_disdrodb_directory
-
+from disdrodb.l0.l0_reader import get_station_reader
 
 # current file path
 PACKAGE_DIR = os.path.dirname(os.path.dirname(os.path.abspath(__file__)))

disdrodb/l0/check_standards.py

@@ -17,18 +17,20 @@
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 # -----------------------------------------------------------------------------.
 import logging
+
 import numpy as np
 import pandas as pd
+
 from disdrodb.l0.standards import (
+    get_data_range_dict,
     get_l0a_dtype,
     get_valid_values_dict,
-    get_data_range_dict,
 )
 
 # Logger
 from disdrodb.utils.logger import (
-    log_info,
     log_error,
+    log_info,
 )
 
 logger = logging.getLogger(__name__)

disdrodb/l0/io.py

@@ -17,16 +17,18 @@
 # You should have received a copy of the GNU General Public License
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 # -----------------------------------------------------------------------------.
+import glob
 import logging
 import os
 import shutil
-import glob
+from pathlib import Path
+from typing import Union
+
 import numpy as np
 import pandas as pd
 import xarray as xr
-from typing import Union
+
 from disdrodb.utils.logger import log_info, log_warning
-from pathlib import Path
 
 logger = logging.getLogger(__name__)
 
@@ -640,8 +642,7 @@ def _check_raw_dir_data_subfolders(raw_dir):
 
 def _check_raw_dir_metadata(raw_dir, verbose=True):
     """Check metadata in the raw_dir directory."""
-    from disdrodb.l0.metadata import write_default_metadata
-    from disdrodb.l0.metadata import check_metadata_compliance
+    from disdrodb.l0.metadata import check_metadata_compliance, write_default_metadata
 
     # Get list of stations
     raw_data_dir = os.path.join(raw_dir, "data")
@@ -707,8 +708,7 @@ def _check_raw_dir_metadata(raw_dir, verbose=True):
 
 def _check_raw_dir_issue(raw_dir, verbose=True):
     """Check issue yaml files in the raw_dir directory."""
-    from disdrodb.l0.issue import write_default_issue
-    from disdrodb.l0.issue import check_issue_file
+    from disdrodb.l0.issue import check_issue_file, write_default_issue
 
     # Get list of stations
     raw_data_dir = os.path.join(raw_dir, "data")
@@ -1005,7 +1005,7 @@ def create_initial_directory_structure(raw_dir, processed_dir, station_name, for
 
 def create_directory_structure(processed_dir, product_level, station_name, force, verbose=False):
     """Create directory structure for L0B and higher DISDRODB products."""
-    from disdrodb.api.io import check_product_level, _get_list_stations_with_data
+    from disdrodb.api.io import _get_list_stations_with_data, check_product_level
 
     # Check inputs
     check_product_level(product_level)

disdrodb/l0/issue.py

@@ -18,13 +18,14 @@
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 # -----------------------------------------------------------------------------.
 
-import os
-import yaml
 import logging
+import os
+
 import numpy as np
 import pandas as pd
-from disdrodb.utils.logger import log_error
+import yaml
 
+from disdrodb.utils.logger import log_error
 
 logger = logging.getLogger(__name__)
 

disdrodb/l0/l0_processing.py

@@ -14,43 +14,45 @@
 # You should have received a copy of the GNU General Public License
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 # -----------------------------------------------------------------------------.
+import datetime
+import functools
+import logging
 import os
-import time
-import dask
 import shutil
+import time
+
 import click
-import logging
-import functools
-import datetime
+import dask
 import dask.bag as db
 
+# Standards
+from disdrodb.l0.check_standards import check_sensor_name
+
 # Directory
-from disdrodb.l0.io import get_raw_file_list, get_l0a_file_list
 from disdrodb.l0.io import (
-    create_initial_directory_structure,
     create_directory_structure,
+    create_initial_directory_structure,
+    get_l0a_file_list,
+    get_raw_file_list,
 )
+from disdrodb.l0.issue import read_issue
 
 # Metadata & Issue
 from disdrodb.l0.metadata import read_metadata
-from disdrodb.l0.issue import read_issue
-
-# Standards
-from disdrodb.l0.check_standards import check_sensor_name
-
-# L0B_processing
-from disdrodb.utils.scripts import _execute_cmd
 
 # Logger
 from disdrodb.utils.logger import (
-    create_file_logger,
     close_logger,
+    create_file_logger,
     define_summary_log,
-    log_info,
     # log_warning,
     log_error,
+    log_info,
 )
 
+# L0B_processing
+from disdrodb.utils.scripts import _execute_cmd
+
 logger = logging.getLogger(__name__)
 
 # -----------------------------------------------------------------------------.
@@ -177,12 +179,12 @@ def _generate_l0b(
     debugging_mode,
     parallel,
 ):
-    from disdrodb.utils.logger import create_file_logger
     from disdrodb.l0.io import get_L0B_fpath, read_L0A_dataframe
     from disdrodb.l0.l0b_processing import (
         create_l0b_from_l0a,
         write_l0b,
     )
+    from disdrodb.utils.logger import create_file_logger
 
     # -----------------------------------------------------------------.
     # Create file logger
@@ -257,9 +259,9 @@ def _generate_l0b_from_nc(
     verbose,
     parallel,
 ):
-    from disdrodb.utils.logger import create_file_logger
     from disdrodb.l0.io import get_L0B_fpath
     from disdrodb.l0.l0b_processing import process_raw_nc, write_l0b
+    from disdrodb.utils.logger import create_file_logger
 
     # -----------------------------------------------------------------.
     # Create file logger
@@ -897,8 +899,8 @@ def run_disdrodb_l0_station(
         For L0B, it processes just the first 100 rows of 3 L0A files for each station.
         The default is False.
     """
-    from disdrodb.l0.l0b_concat import run_disdrodb_l0b_concat_station
     from disdrodb.api.io import _get_disdrodb_directory
+    from disdrodb.l0.l0b_concat import run_disdrodb_l0b_concat_station
 
     # ---------------------------------------------------------------------.
     t_i = time.time()

disdrodb/l0/l0_reader.py

@@ -18,8 +18,8 @@
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 # -----------------------------------------------------------------------------.
 
-import os
 import logging
+import os
 
 logger = logging.getLogger(__name__)