Code

Whatshap allelic#1086

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Merged

katsikora merged 39 commits intodevelopmaxplanck-ie/snakepipes:developfrom KS2025maxplanck-ie/snakepipes:KS2025Copy head branch name to clipboardJan 13, 2025

+191-13

Commits

Commits on Jan 7, 2025

• test dag

  

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  5b5699f

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• fix modes

  

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• abspath

  

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• args

  

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• fix

  

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• sorted

  

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  9c716ee

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• fix

  

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  49b2c30

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Commits on Jan 9, 2025

• wildcard constrains

  

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• does this work

  

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  12a0c7b

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• parenthesis

  

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• expand

  

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• expand

  

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• suffix

  

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Commits on Jan 10, 2025

• allelic feature counts

  

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• dt qc

  

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• deeptools allelic

  

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• dtqc

  

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• fixes

  

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  305e916

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• multiqc

  

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• pvcf

  

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• reverse in

  

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• multiqc

  

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• parenthesis

  

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• dqc

  

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• DESeq2

  

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• test dag

  

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• link bam

  

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• frombam

  

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• index external

  

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• quotes

  

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Commits on Jan 13, 2025

• escape fromBAM

  

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  41f92a7

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• test dag

  

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  9547bd0

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• test dag

  

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• test dag

  

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• pytest

  

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• pytest

  

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• docs

  

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• underline

  

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• underline

  

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  5681398

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