Snakemake environment setup

Snakemake is a pipeline manager for bioinformatic analyses. It is used by maxsonBraunLab pipelines. This repo contains instructions for setting up a Linux-compatible Snakemake environment via Conda and a command line interface.

To create a Snakemake environment:

1. Download the environment configuration file (snakemake.yml) from this repo.
2. Navigate to the folder where the yml file has been saved.
3. Run conda env create -f snakemake.yml and follow the command line prompts.