Autoupdate mmstudio/latest

micro-manager · Apr 6, 2024 · d468c5a · d468c5a
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diff --git a/mmstudio/latest/deprecated-list.html b/mmstudio/latest/deprecated-list.html
@@ -413,23 +413,23 @@ <h2 title="Contents">Contents</h2>
 </td>
 </tr>
 <tr class="rowColor">
+<td class="colOne"><a href="org/micromanager/data/SummaryMetadata.html#copy--">org.micromanager.data.SummaryMetadata.copy()</a>
+<div class="block"><span class="deprecationComment">- Use SummaryMetadata.Builder.copyBuilder instead</span></div>
+</td>
+</tr>
+<tr class="altColor">
 <td class="colOne"><a href="org/micromanager/data/Coords.html#copy--">org.micromanager.data.Coords.copy()</a>
 <div class="block"><span class="deprecationComment">Use <a href="org/micromanager/data/Coords.html#copyBuilder--"><code>copyBuilder</code></a> instead</span></div>
 </td>
 </tr>
-<tr class="altColor">
+<tr class="rowColor">
 <td class="colOne"><a href="org/micromanager/data/Metadata.html#copy--">org.micromanager.data.Metadata.copy()</a>
 <div class="block"><span class="deprecationComment">Use the appropriate of the following:
      <a href="org/micromanager/data/Metadata.html#copyBuilderPreservingUUID--"><code>Metadata.copyBuilderPreservingUUID()</code></a>, <a href="org/micromanager/data/Metadata.html#copyBuilderWithNewUUID--"><code>Metadata.copyBuilderWithNewUUID()</code></a>,
      <a href="org/micromanager/data/Metadata.html#copyBuilderRemovingUUID--"><code>Metadata.copyBuilderRemovingUUID()</code></a>. This method is equivalent to
      <code>copyBuilderPreservingUUID</code>.</span></div>
 </td>
 </tr>
-<tr class="rowColor">
-<td class="colOne"><a href="org/micromanager/data/SummaryMetadata.html#copy--">org.micromanager.data.SummaryMetadata.copy()</a>
-<div class="block"><span class="deprecationComment">- Use SummaryMetadata.Builder.copyBuilder instead</span></div>
-</td>
-</tr>
 <tr class="altColor">
 <td class="colOne"><a href="org/micromanager/display/DisplaySettings.html#copy--">org.micromanager.display.DisplaySettings.copy()</a></td>
 </tr>

diff --git a/mmstudio/latest/org/micromanager/class-use/PropertyMap.html b/mmstudio/latest/org/micromanager/class-use/PropertyMap.html
diff --git a/mmstudio/latest/org/micromanager/data/class-use/Coords.html b/mmstudio/latest/org/micromanager/data/class-use/Coords.html
@@ -252,14 +252,14 @@ <h3>Uses of <a href="../../../../org/micromanager/data/Coords.html" title="inter
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">RewritableDatastore.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/RewritableDatastore.html#deleteImage-org.micromanager.data.Coords-">deleteImage</a></span>(<a href="../../../../org/micromanager/data/Coords.html" title="interface in org.micromanager.data">Coords</a>&nbsp;coords)</code>
-<div class="block">Delete an image from the Datastore.</div>
+<td class="colLast"><span class="typeNameLabel">RewritableStorage.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/RewritableStorage.html#deleteImage-org.micromanager.data.Coords-">deleteImage</a></span>(<a href="../../../../org/micromanager/data/Coords.html" title="interface in org.micromanager.data">Coords</a>&nbsp;coords)</code>
+<div class="block">Delete an image from the Storage.</div>
 </td>
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">RewritableStorage.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/RewritableStorage.html#deleteImage-org.micromanager.data.Coords-">deleteImage</a></span>(<a href="../../../../org/micromanager/data/Coords.html" title="interface in org.micromanager.data">Coords</a>&nbsp;coords)</code>
-<div class="block">Delete an image from the Storage.</div>
+<td class="colLast"><span class="typeNameLabel">RewritableDatastore.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/RewritableDatastore.html#deleteImage-org.micromanager.data.Coords-">deleteImage</a></span>(<a href="../../../../org/micromanager/data/Coords.html" title="interface in org.micromanager.data">Coords</a>&nbsp;coords)</code>
+<div class="block">Delete an image from the Datastore.</div>
 </td>
 </tr>
 <tr class="rowColor">
@@ -390,14 +390,14 @@ <h3>Uses of <a href="../../../../org/micromanager/data/Coords.html" title="inter
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/data/Coords.html" title="interface in org.micromanager.data">Coords</a></code></td>
-<td class="colLast"><span class="typeNameLabel">DisplayPositionChangedEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/DisplayPositionChangedEvent.html#getDisplayPosition--">getDisplayPosition</a></span>()</code>
-<div class="block">returns the new display position.</div>
+<td class="colLast"><span class="typeNameLabel">AbstractDataViewer.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/AbstractDataViewer.html#getDisplayPosition--">getDisplayPosition</a></span>()</code>
+<div class="block">Implements <code>getDisplayPosition</code>.</div>
 </td>
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/data/Coords.html" title="interface in org.micromanager.data">Coords</a></code></td>
-<td class="colLast"><span class="typeNameLabel">AbstractDataViewer.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/AbstractDataViewer.html#getDisplayPosition--">getDisplayPosition</a></span>()</code>
-<div class="block">Implements <code>getDisplayPosition</code>.</div>
+<td class="colLast"><span class="typeNameLabel">DisplayPositionChangedEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/DisplayPositionChangedEvent.html#getDisplayPosition--">getDisplayPosition</a></span>()</code>
+<div class="block">returns the new display position.</div>
 </td>
 </tr>
 <tr class="rowColor">

diff --git a/mmstudio/latest/org/micromanager/data/class-use/Datastore.html b/mmstudio/latest/org/micromanager/data/class-use/Datastore.html
@@ -268,36 +268,36 @@ <h3>Uses of <a href="../../../../org/micromanager/data/Datastore.html" title="in
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/data/Datastore.html" title="interface in org.micromanager.data">Datastore</a></code></td>
-<td class="colLast"><span class="typeNameLabel">ImageOverwrittenEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/ImageOverwrittenEvent.html#getDatastore--">getDatastore</a></span>()</code>
-<div class="block">Provides the Datastore this image was added to; potentially useful for
- code that listens to events from multiple Datastores.</div>
-</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><code><a href="../../../../org/micromanager/data/Datastore.html" title="interface in org.micromanager.data">Datastore</a></code></td>
 <td class="colLast"><span class="typeNameLabel">DatastoreClosingEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/DatastoreClosingEvent.html#getDatastore--">getDatastore</a></span>()</code>
 <div class="block">Returns the Datastore that is closing.</div>
 </td>
 </tr>
-<tr class="altColor">
+<tr class="rowColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/data/Datastore.html" title="interface in org.micromanager.data">Datastore</a></code></td>
 <td class="colLast"><span class="typeNameLabel">Pipeline.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/Pipeline.html#getDatastore--">getDatastore</a></span>()</code>
 <div class="block">Get the output Datastore for this Pipeline.</div>
 </td>
 </tr>
-<tr class="rowColor">
+<tr class="altColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/data/Datastore.html" title="interface in org.micromanager.data">Datastore</a></code></td>
-<td class="colLast"><span class="typeNameLabel">ImageDeletedEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/ImageDeletedEvent.html#getDatastore--">getDatastore</a></span>()</code>
+<td class="colLast"><span class="typeNameLabel">ImageOverwrittenEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/ImageOverwrittenEvent.html#getDatastore--">getDatastore</a></span>()</code>
 <div class="block">Provides the Datastore this image was added to; potentially useful for
  code that listens to events from multiple Datastores.</div>
 </td>
 </tr>
-<tr class="altColor">
+<tr class="rowColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/data/Datastore.html" title="interface in org.micromanager.data">Datastore</a></code></td>
 <td class="colLast"><span class="typeNameLabel">Annotation.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/Annotation.html#getDatastore--">getDatastore</a></span>()</code>
 <div class="block">Return the datastore to which this annotation is associated.</div>
 </td>
 </tr>
+<tr class="altColor">
+<td class="colFirst"><code><a href="../../../../org/micromanager/data/Datastore.html" title="interface in org.micromanager.data">Datastore</a></code></td>
+<td class="colLast"><span class="typeNameLabel">ImageDeletedEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/ImageDeletedEvent.html#getDatastore--">getDatastore</a></span>()</code>
+<div class="block">Provides the Datastore this image was added to; potentially useful for
+ code that listens to events from multiple Datastores.</div>
+</td>
+</tr>
 <tr class="rowColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/data/Datastore.html" title="interface in org.micromanager.data">Datastore</a></code></td>
 <td class="colLast"><span class="typeNameLabel">DataManager.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/DataManager.html#loadData-java.awt.Component-java.lang.String-boolean-">loadData</a></span>(java.awt.Component&nbsp;parent,

diff --git a/mmstudio/latest/org/micromanager/data/class-use/Image.html b/mmstudio/latest/org/micromanager/data/class-use/Image.html
@@ -514,7 +514,7 @@ <h3>Uses of <a href="../../../../org/micromanager/data/Image.html" title="interf
 <tbody>
 <tr class="altColor">
 <td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">Overlay.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/overlay/Overlay.html#paintOverlay-java.awt.Graphics2D-java.awt.Rectangle-org.micromanager.display.DisplaySettings-java.util.List-org.micromanager.data.Image-java.awt.geom.Rectangle2D.Float-">paintOverlay</a></span>(java.awt.Graphics2D&nbsp;graphicsContext,
+<td class="colLast"><span class="typeNameLabel">AbstractOverlay.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/overlay/AbstractOverlay.html#paintOverlay-java.awt.Graphics2D-java.awt.Rectangle-org.micromanager.display.DisplaySettings-java.util.List-org.micromanager.data.Image-java.awt.geom.Rectangle2D.Float-">paintOverlay</a></span>(java.awt.Graphics2D&nbsp;graphicsContext,
             java.awt.Rectangle&nbsp;screenRect,
             <a href="../../../../org/micromanager/display/DisplaySettings.html" title="interface in org.micromanager.display">DisplaySettings</a>&nbsp;displaySettings,
             java.util.List&lt;<a href="../../../../org/micromanager/data/Image.html" title="interface in org.micromanager.data">Image</a>&gt;&nbsp;images,
@@ -525,7 +525,7 @@ <h3>Uses of <a href="../../../../org/micromanager/data/Image.html" title="interf
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">AbstractOverlay.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/overlay/AbstractOverlay.html#paintOverlay-java.awt.Graphics2D-java.awt.Rectangle-org.micromanager.display.DisplaySettings-java.util.List-org.micromanager.data.Image-java.awt.geom.Rectangle2D.Float-">paintOverlay</a></span>(java.awt.Graphics2D&nbsp;graphicsContext,
+<td class="colLast"><span class="typeNameLabel">Overlay.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/overlay/Overlay.html#paintOverlay-java.awt.Graphics2D-java.awt.Rectangle-org.micromanager.display.DisplaySettings-java.util.List-org.micromanager.data.Image-java.awt.geom.Rectangle2D.Float-">paintOverlay</a></span>(java.awt.Graphics2D&nbsp;graphicsContext,
             java.awt.Rectangle&nbsp;screenRect,
             <a href="../../../../org/micromanager/display/DisplaySettings.html" title="interface in org.micromanager.display">DisplaySettings</a>&nbsp;displaySettings,
             java.util.List&lt;<a href="../../../../org/micromanager/data/Image.html" title="interface in org.micromanager.data">Image</a>&gt;&nbsp;images,
@@ -545,7 +545,7 @@ <h3>Uses of <a href="../../../../org/micromanager/data/Image.html" title="interf
 <tbody>
 <tr class="altColor">
 <td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">Overlay.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/overlay/Overlay.html#paintOverlay-java.awt.Graphics2D-java.awt.Rectangle-org.micromanager.display.DisplaySettings-java.util.List-org.micromanager.data.Image-java.awt.geom.Rectangle2D.Float-">paintOverlay</a></span>(java.awt.Graphics2D&nbsp;graphicsContext,
+<td class="colLast"><span class="typeNameLabel">AbstractOverlay.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/overlay/AbstractOverlay.html#paintOverlay-java.awt.Graphics2D-java.awt.Rectangle-org.micromanager.display.DisplaySettings-java.util.List-org.micromanager.data.Image-java.awt.geom.Rectangle2D.Float-">paintOverlay</a></span>(java.awt.Graphics2D&nbsp;graphicsContext,
             java.awt.Rectangle&nbsp;screenRect,
             <a href="../../../../org/micromanager/display/DisplaySettings.html" title="interface in org.micromanager.display">DisplaySettings</a>&nbsp;displaySettings,
             java.util.List&lt;<a href="../../../../org/micromanager/data/Image.html" title="interface in org.micromanager.data">Image</a>&gt;&nbsp;images,
@@ -556,7 +556,7 @@ <h3>Uses of <a href="../../../../org/micromanager/data/Image.html" title="interf
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">AbstractOverlay.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/overlay/AbstractOverlay.html#paintOverlay-java.awt.Graphics2D-java.awt.Rectangle-org.micromanager.display.DisplaySettings-java.util.List-org.micromanager.data.Image-java.awt.geom.Rectangle2D.Float-">paintOverlay</a></span>(java.awt.Graphics2D&nbsp;graphicsContext,
+<td class="colLast"><span class="typeNameLabel">Overlay.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/overlay/Overlay.html#paintOverlay-java.awt.Graphics2D-java.awt.Rectangle-org.micromanager.display.DisplaySettings-java.util.List-org.micromanager.data.Image-java.awt.geom.Rectangle2D.Float-">paintOverlay</a></span>(java.awt.Graphics2D&nbsp;graphicsContext,
             java.awt.Rectangle&nbsp;screenRect,
             <a href="../../../../org/micromanager/display/DisplaySettings.html" title="interface in org.micromanager.display">DisplaySettings</a>&nbsp;displaySettings,
             java.util.List&lt;<a href="../../../../org/micromanager/data/Image.html" title="interface in org.micromanager.data">Image</a>&gt;&nbsp;images,

diff --git a/mmstudio/latest/org/micromanager/data/class-use/SummaryMetadata.html b/mmstudio/latest/org/micromanager/data/class-use/SummaryMetadata.html
@@ -140,13 +140,13 @@ <h3>Uses of <a href="../../../../org/micromanager/data/SummaryMetadata.html" tit
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/data/SummaryMetadata.html" title="interface in org.micromanager.data">SummaryMetadata</a></code></td>
-<td class="colLast"><span class="typeNameLabel">DataProviderHasNewSummaryMetadataEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/DataProviderHasNewSummaryMetadataEvent.html#getSummaryMetadata--">getSummaryMetadata</a></span>()</code>
+<td class="colLast"><span class="typeNameLabel">DataProvider.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/DataProvider.html#getSummaryMetadata--">getSummaryMetadata</a></span>()</code>
 <div class="block">Returns Summary Metadata.</div>
 </td>
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/data/SummaryMetadata.html" title="interface in org.micromanager.data">SummaryMetadata</a></code></td>
-<td class="colLast"><span class="typeNameLabel">DataProvider.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/DataProvider.html#getSummaryMetadata--">getSummaryMetadata</a></span>()</code>
+<td class="colLast"><span class="typeNameLabel">DataProviderHasNewSummaryMetadataEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/data/DataProviderHasNewSummaryMetadataEvent.html#getSummaryMetadata--">getSummaryMetadata</a></span>()</code>
 <div class="block">Returns Summary Metadata.</div>
 </td>
 </tr>

diff --git a/mmstudio/latest/org/micromanager/display/class-use/DataViewer.html b/mmstudio/latest/org/micromanager/display/class-use/DataViewer.html
@@ -146,20 +146,20 @@ <h3>Uses of <a href="../../../../org/micromanager/display/DataViewer.html" title
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/display/DataViewer.html" title="interface in org.micromanager.display">DataViewer</a></code></td>
-<td class="colLast"><span class="typeNameLabel">DisplaySettingsChangedEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/DisplaySettingsChangedEvent.html#getDataViewer--">getDataViewer</a></span>()</code>
-<div class="block">Get the data viewer.</div>
+<td class="colLast"><span class="typeNameLabel">DisplayDidShowImageEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/DisplayDidShowImageEvent.html#getDataViewer--">getDataViewer</a></span>()</code>
+<div class="block">Returns the Dataviewer displaying the image.</div>
 </td>
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/display/DataViewer.html" title="interface in org.micromanager.display">DataViewer</a></code></td>
-<td class="colLast"><span class="typeNameLabel">DisplayDidShowImageEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/DisplayDidShowImageEvent.html#getDataViewer--">getDataViewer</a></span>()</code>
-<div class="block">Returns the Dataviewer displaying the image.</div>
+<td class="colLast"><span class="typeNameLabel">DisplayPositionChangedEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/DisplayPositionChangedEvent.html#getDataViewer--">getDataViewer</a></span>()</code>
+<div class="block">The dataViewer posting this event.</div>
 </td>
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code><a href="../../../../org/micromanager/display/DataViewer.html" title="interface in org.micromanager.display">DataViewer</a></code></td>
-<td class="colLast"><span class="typeNameLabel">DisplayPositionChangedEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/DisplayPositionChangedEvent.html#getDataViewer--">getDataViewer</a></span>()</code>
-<div class="block">The dataViewer posting this event.</div>
+<td class="colLast"><span class="typeNameLabel">DisplaySettingsChangedEvent.</span><code><span class="memberNameLink"><a href="../../../../org/micromanager/display/DisplaySettingsChangedEvent.html#getDataViewer--">getDataViewer</a></span>()</code>
+<div class="block">Get the data viewer.</div>
 </td>
 </tr>
 <tr class="altColor">