Explicit handling of pak package cache for pak-enabled renv #213
Workflow file for this run
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| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| # Name of the workflow => usethis::use_github_actions_badge("CI-CD-renv") | |
| name: CI-CD-renv | |
| on: | |
| # Triggered on push and pull request events | |
| push: | |
| pull_request: | |
| # Allow manual runs from the Actions tab | |
| workflow_dispatch: | |
| # Monthly runs on the 1st day of the month at midnight | |
| # (specific for ShinyCICD maintenance) | |
| schedule: | |
| - cron: '0 0 1 * *' | |
| jobs: | |
| CI-CD: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| # We keep a matrix for convenience, but we would typically just run on one | |
| # single OS and R version, aligned with the target deployment environment | |
| matrix: | |
| config: | |
| - {os: ubuntu-latest, r: 'release'} | |
| env: | |
| # Access token for GitHub | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| # Preserve package sources for informative references in case of errors | |
| R_KEEP_PKG_SOURCE: yes | |
| # Enable pak-based installation for renv (including system requirements) | |
| RENV_CONFIG_PAK_ENABLED: TRUE | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v3 | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| # No RStudio Package Manager to respect renv.lock | |
| use-public-rspm: false | |
| # Handling the pak package cache for pak-enabled renv is not taken care of (yet) | |
| # by r-lib/actions/setup-renv (or renv itself) | |
| - name: Configure pak package cache | |
| id: pak-cache | |
| run: | | |
| # Package cache used by pak | |
| cat("R_PKG_CACHE_DIR=${{ runner.temp }}/pkgcache\n", file = Sys.getenv("GITHUB_ENV"), append = TRUE) | |
| cache_version = 1 | |
| cat("os-version=", sessionInfo()$running, "\n", file = Sys.getenv("GITHUB_OUTPUT"), sep = "", append = TRUE) | |
| cat("r-version=", R.Version()$version.string, "\n", file = Sys.getenv("GITHUB_OUTPUT"), sep = "", append = TRUE) | |
| cat("cache-version=", cache_version, file = Sys.getenv("GITHUB_OUTPUT"), sep = "", append = TRUE) | |
| shell: Rscript {0} | |
| - name: Restore pak package cache | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.R_PKG_CACHE_DIR }} | |
| key: pak-${{ steps.pak-cache.outputs.os-version }}-${{ steps.pak-cache.outputs.r-version }}-${{ steps.pak-cache.outputs.cache-version }}-${{ hashFiles('renv.lock') }} | |
| restore-keys: pak-${{ steps.pak-cache.outputs.os-version }}-${{ steps.pak-cache.outputs.r-version }}-${{ steps.pak-cache.outputs.cache-version }}- | |
| - name: Activate renv and restore packages with cache | |
| uses: r-lib/actions/setup-renv@v2 | |
| - name: Install R CMD check | |
| run: install.packages("rcmdcheck") | |
| shell: Rscript {0} | |
| - name: Check package | |
| uses: r-lib/actions/check-r-package@v2 | |
| - name: Deploy to shinyapps.io | |
| # Continuous deployment only for pushes to the main / master branch | |
| if: true || (github.ref == 'refs/heads/main' || github.ref == 'refs/heads/master') | |
| env: | |
| SHINYAPPS_ACCOUNT: ${{ secrets.SHINYAPPS_ACCOUNT }} | |
| SHINYAPPS_TOKEN: ${{ secrets.SHINYAPPS_TOKEN }} | |
| SHINYAPPS_SECRET: ${{ secrets.SHINYAPPS_SECRET }} | |
| run: Rscript deploy/deploy-shinyapps.R |