Merge branch 'fresh-nf-test' of github.com:nf-core/sarek into fresh-n…

…f-test
nf-core · Oct 24, 2024 · 7e7b66c · 7e7b66c
2 parents 016377c + acb7cb9
commit 7e7b66c
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diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -95,12 +95,10 @@ jobs:
           path: ~/.cache/pip
           key: ${{ runner.os }}-pip-pdiff
 
-      - name: Set up pdiff to see diff between nf-test snapshots
-        run: |
-          python -m pip install --upgrade pip
-          pip install pdiff cryptography
+      - name: Install pdiff
+        run: python -m pip install --upgrade pip pdiff cryptography
 
-      - name: Set up Miniconda
+      - name: Set up miniconda
         if: matrix.profile == 'conda'
         uses: conda-incubator/setup-miniconda@a4260408e20b96e80095f42ff7f1a15b27dd94ca # v3
         with:

diff --git a/tests/default.nf.test b/tests/default.nf.test
@@ -2,6 +2,8 @@ nextflow_pipeline {
 
     name "Test pipeline"
     script "../main.nf"
+    tag "pipeline"
+    tag "pipeline_sarek"
 
     test("Run with profile test") {
 

diff --git a/tests/default.nf.test.snap b/tests/default.nf.test.snap
@@ -324,4 +324,4 @@
         },
         "timestamp": "2024-10-08T12:09:25.505363"
     }
-}
+}
-Original file line number
+Diff line change
@@ Expand Up / @@ -324,4 +324,4 @@ @@
             },
             "timestamp": "2024-10-08T12:09:25.505363"
         }
-    }
+    }