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FIX: manifest DOI display on CLI #1694

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merged 3 commits into from
Oct 23, 2024
Merged

FIX: manifest DOI display on CLI #1694

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0303cb2
Update nextflow.config
maxulysse Oct 23, 2024
39c9b8b
Update CHANGELOG.md
maxulysse Oct 23, 2024
143ac89
Merge branch 'dev' into maxulysse-patch-1
maxulysse Oct 23, 2024
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -28,6 +28,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- [1661](https://github.com/nf-core/sarek/pull/1661) - nf-test pipeline level tests
- [1673](https://github.com/nf-core/sarek/pull/1673) - Print warning message instead of silent error with Nextflow versions prior to 24.08.0edge
- [1693](https://github.com/nf-core/sarek/pull/1693) - Fixes flowcell retrieval during samplesheet parsing
- [1694](https://github.com/nf-core/sarek/pull/1694) - Fix manifest DOI display on CLI

### Removed

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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -415,7 +415,7 @@ validation {
\033[0;35m ${manifest.name} ${manifest.version}\033[0m
-\033[2m----------------------------------------------------\033[0m-
"""
afterText = """${manifest.doi ? "* The pipeline\n" : ""}${manifest.doi.tokenize(",").collect { " https://doi.org/${it.trim().replace('https://doi.org/','')}"}.join("\n")}${manifest.doi ? "\n" : ""}
afterText = """${manifest.doi ? "\n* The pipeline\n" : ""}${manifest.doi.tokenize(",").collect { " https://doi.org/${it.trim().replace('https://doi.org/','')}"}.join("\n")}${manifest.doi ? "\n" : ""}
* The nf-core framework
https://doi.org/10.1038/s41587-020-0439-x

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