Fixes #2807 text and logical def- neural progenitor cell

[Caroline-99]

Fixes #2807

• Fixed the textual def and added references
• Added developmental logical axiom

[Caroline-99]

#gogoeditdiff

[github-actions]

Here's a diff of how these changes impact the classified ontology (on -base file):

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2025-01-08/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-master.owl/cl-base.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2025-01-08/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-pr.owl/cl-base.owl

Ontology imports

Ontology annotations

ganglion mother cell http://purl.obolibrary.org/obo/CL_0000469

Removed

• ganglion mother cell SubClassOf eukaryotic cell

• ganglion mother cell SubClassOf BFO_0000002

neural progenitor cell http://purl.obolibrary.org/obo/CL_0011020

Removed

• neural progenitor cell IAO_0000115 "An undifferentiated cell that originates from a neural stem cell and has the capacity to generate multiple types of lineage-restricted progenitors but not to self-renew."
  • hasDbXref "PMID:30574073"

Added

• neural progenitor cell IAO_0000115 "An undifferentiated cell derived from a neural stem cell, with a limited capacity to self-renew (Dibajnia and Morshead, 2013) and the ability to generate multiple types of lineage-restricted progenitors, contributing to the formation of neurons, astrocytes, and oligodendrocytes."

  • hasDbXref "PMID:37508487"

  • hasDbXref "PMID:23064725"

  • hasDbXref "PMID:30574073"

• neural progenitor cell SubClassOf RO_0002202 some neural stem cell

• neural progenitor cell SubClassOf BFO_0000002

• neural progenitor cell SubClassOf eukaryotic cell

[github-actions]

Here's a diff of your edit file (unreasoned)

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/master/src/ontology/cl-edit.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/branch/src/ontology/cl-edit.owl

Ontology imports

Ontology annotations

neural progenitor cell http://purl.obolibrary.org/obo/CL_0011020

Removed

• neural progenitor cell definition "An undifferentiated cell that originates from a neural stem cell and has the capacity to generate multiple types of lineage-restricted progenitors but not to self-renew."
  • database_cross_reference "PMID:30574073"

Added

• neural progenitor cell definition "An undifferentiated cell derived from a neural stem cell, with a limited capacity to self-renew (Dibajnia and Morshead, 2013) and the ability to generate multiple types of lineage-restricted progenitors, contributing to the formation of neurons, astrocytes, and oligodendrocytes."

  • database_cross_reference "PMID:37508487"

  • database_cross_reference "PMID:30574073"

  • database_cross_reference "PMID:23064725"

• neural progenitor cell SubClassOf develops from some neural stem cell