Replace usages of deprecated Git protocol by HTTPS

See https://github.blog/2021-09-01-improving-git-protocol-security-github/
for more information

home/jobs/BIOFORMATS-build/config.xml

@@ -26,7 +26,7 @@
     <configVersion>2</configVersion>
     <userRemoteConfigs>
       <hudson.plugins.git.UserRemoteConfig>
-        <url>git://github.com/$SPACE_USER/bio-formats-build</url>
+        <url>https://github.com/$SPACE_USER/bio-formats-build</url>
       </hudson.plugins.git.UserRemoteConfig>
     </userRemoteConfigs>
     <branches>

home/jobs/BIOFORMATS-image/config.xml

@@ -8,7 +8,7 @@
     <configVersion>2</configVersion>
     <userRemoteConfigs>
       <hudson.plugins.git.UserRemoteConfig>
-        <url>git://github.com/$SPACE_USER/bio-formats-build</url>
+        <url>https://github.com/$SPACE_USER/bio-formats-build</url>
       </hudson.plugins.git.UserRemoteConfig>
     </userRemoteConfigs>
     <branches>

home/jobs/OMERO-build-push/config.xml

@@ -42,7 +42,7 @@
 
   library identifier: 'recursiveMerge@master', retriever: modernSCM(
     [$class: 'GitSCMSource',
-     remote: 'git://github.com/ome/jenkins-library-recursivemerge.git'])
+     remote: 'https://github.com/ome/jenkins-library-recursivemerge.git'])
 
   recursiveCheckout(
     repo: 'omero-build.git')

home/jobs/OMERO-build/config.xml

@@ -17,7 +17,7 @@
     <configVersion>2</configVersion>
     <userRemoteConfigs>
       <hudson.plugins.git.UserRemoteConfig>
-        <url>git://github.com/$SPACE_USER/openmicroscopy.git</url>
+        <url>https://github.com/$SPACE_USER/openmicroscopy.git</url>
       </hudson.plugins.git.UserRemoteConfig>
     </userRemoteConfigs>
     <branches>
@@ -82,4 +82,4 @@ source docs/hudson/OMERO.sh
   <buildWrappers>
     <hudson.plugins.timestamper.TimestamperBuildWrapper plugin="[email protected]"/>
   </buildWrappers>
-</project>
+</project>

home/jobs/OMERO-gradle-plugins-push/config.xml

@@ -42,7 +42,7 @@
 
   library identifier: 'recursiveMerge@master', retriever: modernSCM(
     [$class: 'GitSCMSource',
-     remote: 'git://github.com/ome/jenkins-library-recursivemerge.git'])
+     remote: 'https://github.com/ome/jenkins-library-recursivemerge.git'])
 
   recursiveCheckout(
     repo: 'omero-gradle-plugins.git')

home/jobs/OMERO-guides-push/config.xml

@@ -42,7 +42,7 @@
 
   library identifier: 'recursiveMerge@master', retriever: modernSCM(
     [$class: 'GitSCMSource',
-     remote: 'git://github.com/ome/jenkins-library-recursivemerge.git'])
+     remote: 'https://github.com/ome/jenkins-library-recursivemerge.git'])
 
   recursiveCheckout(
     repo: 'omero-guides.git')

home/jobs/OMERO-insight-push/config.xml

@@ -39,7 +39,7 @@
 
   library identifier: 'recursiveMerge@master', retriever: modernSCM(
     [$class: 'GitSCMSource',
-     remote: 'git://github.com/ome/jenkins-library-recursivemerge.git'])
+     remote: 'https://github.com/ome/jenkins-library-recursivemerge.git'])
 
   recursiveCheckout(
     repo: 'omero-insight.git')

home/jobs/OMERO-matlab-push/config.xml

@@ -28,7 +28,7 @@
 
   library identifier: 'recursiveMerge@master', retriever: modernSCM(
     [$class: 'GitSCMSource',
-     remote: 'git://github.com/ome/jenkins-library-recursivemerge.git'])
+     remote: 'https://github.com/ome/jenkins-library-recursivemerge.git'])
 
   recursiveCheckout(
     repo: 'omero-matlab.git')

home/jobs/OMERO-plugins-push/config.xml

@@ -42,7 +42,7 @@
 
   library identifier: 'recursiveMerge@master', retriever: modernSCM(
     [$class: 'GitSCMSource',
-     remote: 'git://github.com/ome/jenkins-library-recursivemerge.git'])
+     remote: 'https://github.com/ome/jenkins-library-recursivemerge.git'])
 
   recursiveCheckout(
     repo: 'omero-plugins.git')

home/jobs/OMERO-python-superbuild-push/config.xml

@@ -42,7 +42,7 @@
 
   library identifier: 'recursiveMerge@master', retriever: modernSCM(
     [$class: 'GitSCMSource',
-     remote: 'git://github.com/ome/jenkins-library-recursivemerge.git'])
+     remote: 'https://github.com/ome/jenkins-library-recursivemerge.git'])
 
   recursiveCheckout(
     repo: 'omero-python-superbuild.git')

home/jobs/OMERO-server/config.xml

@@ -124,8 +124,8 @@ mv $WORKSPACE/$DIST $OMERO_DIST
 
 # INSTALL PYTHON PACKAGES
 source $WORKSPACE/.venv3/bin/activate
-pip install git+git://github.com/$SPACE_USER/omero-metadata.git@$MERGE_PUSH_BRANCH#egg=omero-metadata
-pip install git+git://github.com/$SPACE_USER/omero-cli-render.git@$MERGE_PUSH_BRANCH#egg=omero-cli-render
+pip install git+https://github.com/$SPACE_USER/omero-metadata.git@$MERGE_PUSH_BRANCH#egg=omero-metadata
+pip install git+https://github.com/$SPACE_USER/omero-cli-render.git@$MERGE_PUSH_BRANCH#egg=omero-cli-render
 pip install omero-certificates
 
 for x in *.tar.gz; do

home/jobs/OMERO-test-integration/config.xml

@@ -96,7 +96,7 @@ done
 
 # Cause CLI plugin tests to be run against the relevant version.
 for x in omero-cli-duplicate; do
-    pip install git+git://github.com/$SPACE_USER/$x.git@$MERGE_PUSH_BRANCH#egg=$x
+    pip install git+https://github.com/$SPACE_USER/$x.git@$MERGE_PUSH_BRANCH#egg=$x
 done
 
 ## BUILD

home/jobs/OMERO-web/config.xml

@@ -124,13 +124,13 @@ omero config set omero.web.wsgi_args -- '--log-level=DEBUG --error-logfile=
 omero config set omero.web.application_server.host 0.0.0.0
 
 # OMERO.iviewer installation
-pip install "git+git://github.com/$SPACE_USER/omero-iviewer.git@$MERGE_PUSH_BRANCH#egg=omero-iviewer&subdirectory=plugin"
+pip install "git+https://github.com/$SPACE_USER/omero-iviewer.git@$MERGE_PUSH_BRANCH#egg=omero-iviewer&subdirectory=plugin"
 omero config append omero.web.apps '"omero_iviewer"'
 omero config set omero.web.viewer.view omero_iviewer.views.index
 omero config append omero.web.open_with '["omero_iviewer", "omero_iviewer_index", {"supported_objects":["images", "dataset", "well"], "script_url": "omero_iviewer/openwith.js", "label": "OMERO.iviewer"}]'
 
 # OMERO.figure installation
-pip install git+git://github.com/$SPACE_USER/omero-figure.git@$MERGE_PUSH_BRANCH#egg=omero-figure
+pip install git+https://github.com/$SPACE_USER/omero-figure.git@$MERGE_PUSH_BRANCH#egg=omero-figure
 omero config append omero.web.apps '"omero_figure"'
 omero config append omero.web.ui.top_links '["Figure", "figure_index", {"title": "Open Figure in new tab", "target": "_blank"}]'
 omero config append omero.web.open_with '["omero_figure", "new_figure", {"supported_objects":["images"], "target": "_blank", "label": "OMERO.figure"}]'
@@ -147,28 +147,28 @@ pip --version
 find $WORKSPACE/.venv3 -name \*parade\*
 
 # OMERO.fpbioimage installation
-pip install git+git://github.com/$SPACE_USER/omero-fpbioimage.git@$MERGE_PUSH_BRANCH#egg=omero-fpbioimage
+pip install git+https://github.com/$SPACE_USER/omero-fpbioimage.git@$MERGE_PUSH_BRANCH#egg=omero-fpbioimage
 omero config append omero.web.apps '"omero_fpbioimage"'
 omero config append omero.web.open_with '["omero_fpbioimage", "fpbioimage_index", {"script_url": "fpbioimage/openwith.js", "supported_objects": ["image"], "label": "FPBioimage"}]'
 
 # OMERO.gallery installation
-pip install git+git://github.com/$SPACE_USER/omero-gallery.git@$MERGE_PUSH_BRANCH#egg=omero-gallery
+pip install git+https://github.com/$SPACE_USER/omero-gallery.git@$MERGE_PUSH_BRANCH#egg=omero-gallery
 omero config append omero.web.apps '"omero_gallery"'
 omero config append omero.web.ui.top_links '["Gallery", "webgallery_index", {"title": "Browse Gallery"}]'
 omero config set omero.web.gallery.category_queries '{"all":{"label":"All Studies", "index":0, "query":"FIRST50:Name"}}'
 
 # OMERO.mapr installation
-pip install git+git://github.com/$SPACE_USER/omero-mapr.git@$MERGE_PUSH_BRANCH#egg=omero-mapr
+pip install git+https://github.com/$SPACE_USER/omero-mapr.git@$MERGE_PUSH_BRANCH#egg=omero-mapr
 omero config append omero.web.apps '"omero_mapr"'
 omero config append omero.web.mapr.config '{"menu": "anyvalue", "config":{"default":["Any Value"], "all":[], "ns":["openmicroscopy.org/omero/client/mapAnnotation"], "label":"Any"}}'
 omero config append omero.web.ui.top_links '["Any Map Value", {"viewname": "maprindex_anyvalue"}, {"title": "Search for values in any Key-Value pair"}]'
 
 # OMERO.weberror installation
-pip install git+git://github.com/$SPACE_USER/omero-weberror.git@$MERGE_PUSH_BRANCH#egg=omero-weberror
+pip install git+https://github.com/$SPACE_USER/omero-weberror.git@$MERGE_PUSH_BRANCH#egg=omero-weberror
 omero config append omero.web.apps '"omero_weberror"'
 
 # OMERO.webtest
-pip install git+git://github.com/$SPACE_USER/omero-webtest.git@$MERGE_PUSH_BRANCH#egg=omero-webtest
+pip install git+https://github.com/$SPACE_USER/omero-webtest.git@$MERGE_PUSH_BRANCH#egg=omero-webtest
 omero config append omero.web.apps '"omero_webtest"'
 
 # OMERO.omero-webtagging-autotag installation

home/jobs/WEBSITE-push/config.xml

@@ -42,7 +42,7 @@
 
   library identifier: 'recursiveMerge@master', retriever: modernSCM(
     [$class: 'GitSCMSource',
-     remote: 'git://github.com/ome/jenkins-library-recursivemerge.git'])
+     remote: 'https://github.com/ome/jenkins-library-recursivemerge.git'])
 
   recursiveCheckout(
     repo: 'www.openmicroscopy.org')