Repositories list

• agate

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Jan 24, 2025Jan 24, 2025

• onyx-gui

  Public
  Onyx graphical user interface

  TypeScript

  •1•2•0•6•Updated Jan 23, 2025Jan 23, 2025

• onyx

  Public
  API for pathogen metadata

  Python

  •

  GNU General Public License v3.0

  •1•0•4•6•Updated Jan 22, 2025Jan 22, 2025

• onyx-extension

  Public
  JupyterLab extension for the Onyx GUI

  TypeScript

  •

  GNU General Public License v3.0

  •0•2•0•0•Updated Jan 21, 2025Jan 21, 2025

• roz

  Public
  CLIMB-pathogens S3 ingest solution and officious bureaucrat.

  Python

  •1•0•1•0•Updated Jan 20, 2025Jan 20, 2025

• climb-tre.github.io

  Public
  Python

  •2•0•0•0•Updated Jan 15, 2025Jan 15, 2025

• path-safe_assembler

  Public
  Nextflow

  •0•0•0•0•Updated Jan 6, 2025Jan 6, 2025

• varys

  Public
  A pika based client package for rabbitMQ for use in CLIMB-tree

  Python

  •

  GNU General Public License v3.0

  •2•0•6•1•Updated Jan 6, 2025Jan 6, 2025

• onyx-client

  Public
  CLI and Python library for Onyx

  Python

  •

  GNU General Public License v3.0

  •1•1•0•0•Updated Dec 9, 2024Dec 9, 2024

• agate-gui

  Public
  0•0•0•0•Updated Oct 16, 2024Oct 16, 2024

• docker-images

  Public
  General CLIMB-TRE docker images

  Dockerfile

  •0•0•0•0•Updated Oct 1, 2024Oct 1, 2024