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oushujun committed Jan 14, 2021
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Expand Up @@ -100,6 +100,7 @@ Usage:

<details>
<summary>Other container source...</summary>

`singularity pull EDTA.sif docker://quay.io/biocontainers/edta:1.9.5`

Or
Expand All @@ -111,6 +112,7 @@ Visit [BioContainers](https://quay.io/repository/biocontainers/edta?tab=tags) re

<details>
<summary>Some downsides of using containers...</summary>

1. It is tricky (for me) to specify files with a path to run EDTA. Softlinked files are considered "with path". So please copy all the files to your work directory to run Singularity/docker containers of EDTA.

2. Similarily, it is tricky to specify paths to dependency programs (i.e., repeatmasker, repeatmodeler).
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