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Adds Transformation class#357

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BradyPlanden merged 25 commits intodeveloppybop-team/PyBOP:developfrom 92-transformations-for-varying-scale-parameterspybop-team/PyBOP:92-transformations-for-varying-scale-parametersCopy head branch name to clipboardAug 1, 2024

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Commits on May 30, 2024

• feat: initial transformation class

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Commits on Jun 12, 2024

• Merge branch 'develop' into 92-transformations-for-varying-scale-parameters

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Commits on Jun 17, 2024

• Merge branch 'develop' into 92-transformations-for-varying-scale-parameters

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Commits on Jun 18, 2024

• feat: Integrate transformations into Parameters API, adds log, scaled, and composed transformations, updts for example API usage

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• Merge branch 'develop' into 92-transformations-for-varying-scale-parameters

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Commits on Jun 21, 2024

• tests: add tests, remove redundant methods, add catch on x0==ground_truth

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Commits on Jun 22, 2024

• fix: add _verify_inputs, increase coverage, add temp fix to GaussianLogLikelihood

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• docs: update docstrings

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Commits on Jun 23, 2024

• fix: add catch for transformation == None, updt tests for arg rename

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Commits on Jun 24, 2024

• fix: old args for ScaledTransformation

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Commits on Jul 3, 2024

• tests: add ComposedTransformation unit tests, increase coverage

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Commits on Jul 9, 2024

• Merge branch 'develop' into 92-transformations-for-varying-scale-parameters

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• fix: leftover merge items

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Commits on Jul 10, 2024

• tests: increase coverage, add condition on prior bounds creation, bugfix plotly bounds method

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• Apply suggestions from code review

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• refacotr: remove general transformation methods for ComposedTransformation class

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• Merge branch 'develop' into 92-transformations-for-varying-scale-parameters

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Commits on Jul 11, 2024

• Merge branch 'develop' into 92-transformations-for-varying-scale-parameters

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• fix: apply ruff linting

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Commits on Jul 31, 2024

• fix: review suggestions.

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• fix: remainder suggestions.

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• Merge branch 'refs/heads/develop' into 92-transformations-for-varying-scale-parameters

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• tests: update transformation integration parameters, remove sigma0 value for multi_signal w/ gaussian likelihood

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Commits on Aug 1, 2024

• Apply suggestions from review

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• Update file names, add changelog entry

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