Additions to ruff rules

[BradyPlanden]

Description

Adds additional linting rules to ruff (deployed via pre-commit) and corresponding fixes.

Issue reference

Fixes #385

Review

Before you mark your PR as ready for review, please ensure that you've considered the following:

• Updated the CHANGELOG.md in reverse chronological order (newest at the top) with a concise description of the changes, including the PR number.
• Noted any breaking changes, including details on how it might impact existing functionality.

Type of change

• New Feature: A non-breaking change that adds new functionality.
• Optimization: A code change that improves performance.
• Examples: A change to existing or additional examples.
• Bug Fix: A non-breaking change that addresses an issue.
• Documentation: Updates to documentation or new documentation for new features.
• Refactoring: Non-functional changes that improve the codebase.
• Style: Non-functional changes related to code style (formatting, naming, etc).
• Testing: Additional tests to improve coverage or confirm functionality.
• Other: (Insert description of change)

Key checklist:

• No style issues: $ pre-commit run (or $ nox -s pre-commit) (see CONTRIBUTING.md for how to set this up to run automatically when committing locally, in just two lines of code)
• All unit tests pass: $ nox -s tests
• The documentation builds: $ nox -s doctest

You can run integration tests, unit tests, and doctests together at once, using $ nox -s quick.

Further checks:

• Code is well-commented, especially in complex or unclear areas.
• Added tests that prove my fix is effective or that my feature works.
• Checked that coverage remains or improves, and added tests if necessary to maintain or increase coverage.

Thank you for contributing to our project! Your efforts help us to deliver great software.

[codecov]

Codecov Report

Attention: Patch coverage is 97.56098% with 2 lines in your changes missing coverage. Please review.

Project coverage is 97.88%. Comparing base (97aba6f) to head (bd3d59b).
Report is 649 commits behind head on develop.

Files with missing lines	Patch %	Lines
pybop/models/lithium_ion/base_echem.py	50.00%	1 Missing ⚠️
pybop/plotting/plotly_manager.py	0.00%	1 Missing ⚠️

Additional details and impacted files

@@             Coverage Diff             @@
##           develop     #386      +/-   ##
===========================================
+ Coverage    97.78%   97.88%   +0.09%     
===========================================
  Files           43       43              
  Lines         2579     2598      +19     
===========================================
+ Hits          2522     2543      +21     
+ Misses          57       55       -2     

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[agriyakhetarpal]

Thanks, @BradyPlanden! I am not sure about the drop in coverage however... maybe we can ignore that safely?

[BradyPlanden]

Thanks for the review @agriyakhetarpal, yes - those tests need a bit of thought to wrangle back in. Work for another PR.