Update infra and actions (2023-10)

.github/release.yml

@@ -0,0 +1,19 @@
+changelog:
+  exclude:
+    labels:
+      - ignore-for-release
+    authors:
+      - dependabot
+  categories:
+    - title: Bug Fixes
+      labels:
+        - bug
+    - title: Enhancements
+      labels:
+        - enhancement
+    - title: Maintenance
+      labels:
+        - maintenance
+    - title: Other Changes
+      labels:
+        - "*"

.github/workflows/build_docs.yml

@@ -1,6 +1,5 @@
 
  name: Build Docs
-
  on:
    push:
      # Sequence of patterns matched against refs/tags
@@ -21,25 +20,30 @@
      strategy:
        matrix:
          os: ['ubuntu-latest']
-         environment-file: [ci/311.yaml]
+         environment-file: [ci/312.yaml]
          experimental: [false]
      defaults:
        run:
          shell: bash -l {0}
-     
+
      steps:
        - name: Checkout repo
-         uses: actions/checkout@v3
-
+         uses: actions/checkout@v4
+         with:
+           fetch-depth: 0 # Fetch all history for all branches and tags.
+
        - name: Setup micromamba
-         uses: mamba-org/provision-with-micromamba@main
+         uses: mamba-org/setup-micromamba@v1
          with:
            environment-file: ${{ matrix.environment-file }}
            micromamba-version: 'latest'
-
+
+       - name: Install
+         run: pip install -e . --no-deps --force-reinstall
+
        - name: Make Docs
          run: cd docs; make html
-       
+
        - name: Commit Docs
          run: |
            git clone https://github.com/ammaraskar/sphinx-action-test.git --branch gh-pages --single-branch gh-pages
@@ -51,8 +55,8 @@
            git commit -m "Update documentation" -a || true
            # The above command will fail if no changes were present,
            # so we ignore the return code.
-       
-       - name: push to gh-pages
+
+       - name: Push to gh-pages
          uses: ad-m/github-push-action@master
          with:
             branch: gh-pages

.github/workflows/release_and_publish.yml

@@ -0,0 +1,52 @@
+ #--------------------------------------------------
+ name: Release & Publish
+
+ on:
+   push:
+     # Sequence of patterns matched against refs/tags
+     tags:
+       - "v*" # Push events to matching v*, i.e. v1.0, v20.15.10
+   workflow_dispatch:
+     inputs:
+       version:
+         description: Manual Release
+         default: test
+         required: false
+
+ jobs:
+   build:
+     name: Create release & publish to PyPI
+     runs-on: ubuntu-latest
+
+     steps:
+       - name: Checkout repo
+         uses: actions/checkout@v4
+         with:
+           fetch-depth: 0 # Fetch all history for all branches and tags.
+
+       - name: Set up python
+         uses: actions/setup-python@v4
+         with:
+           python-version: "3.x"
+
+       - name: Install Dependencies
+         run: |
+           python -m pip install --upgrade pip build twine
+           python -m build
+           twine check --strict dist/*
+
+       - name: Create Release Notes
+         uses: actions/github-script@v6
+         with:
+           github-token: ${{secrets.GITHUB_TOKEN}}
+           script: |
+             await github.request(`POST /repos/${{ github.repository }}/releases`, {
+                tag_name: "${{ github.ref }}",
+                generate_release_notes: true
+              });
+
+       - name: Publish distribution 📦 to PyPI
+         uses: pypa/gh-action-pypi-publish@release/v1
+         with:
+           user: __token__
+           password: ${{ secrets.PYPI_PASSWORD }}

.github/workflows/testing.yml

@@ -18,61 +18,53 @@
          required: false
 
  jobs:
-   linting:
-     runs-on: ubuntu-latest
-     steps:
-       - uses: actions/checkout@v3
-       - uses: actions/setup-python@v4
-       - uses: pre-commit/[email protected]
-
    testing:
-     needs: linting
-     env:
-       RUN_TEST: pytest inequality -v -r a -n auto --cov inequality --doctest-modules --cov-config .coveragerc --cov-report xml --color yes --cov-append --cov-report term-missing
      name: ${{ matrix.os }}, ${{ matrix.environment-file }}
      runs-on: ${{ matrix.os }}
      timeout-minutes: 30
      strategy:
        matrix:
          os: [ubuntu-latest]
          environment-file:
-           - ci/38.yaml
-           - ci/39.yaml
-           - ci/310.yaml
+           - ci/310-MIN.yaml
            - ci/311.yaml
-           - ci/311-DEV.yaml
+           - ci/312.yaml
+           - ci/312-DEV.yaml
          include:
-           - environment-file: ci/311.yaml
+           - environment-file: ci/312.yaml
              os: macos-latest
-           - environment-file: ci/311.yaml
+           - environment-file: ci/312.yaml
              os: windows-latest
        fail-fast: false
+
+     defaults:
+       run:
+         shell: bash -l {0}
 
      steps:
        - name: checkout repo
-         uses: actions/checkout@v3
+         uses: actions/checkout@v4
+         with:
+           fetch-depth: 0 # Fetch all history for all branches and tags.
 
        - name: setup micromamba
-         uses: mamba-org/provision-with-micromamba@main
+         uses: mamba-org/setup-micromamba@v1
          with:
            environment-file: ${{ matrix.environment-file }}
            micromamba-version: 'latest'
-
-       - name: install bleeding edge libpysal (Ubuntu / Python 3.11)
-         shell: bash -l {0}
+
+       - name: run tests
          run: |
-           pip install git+https://github.com/pysal/libpysal.git@main
-         if: matrix.os == 'ubuntu-latest' && contains(matrix.environment-file, 'DEV')
-
-       - name: run tests - bash
-         shell: bash -l {0}
-         run: ${{ env.RUN_TEST }}
-         if: matrix.os != 'windows-latest'
-
-       - name: run tests - powershell
-         shell: powershell
-         run: ${{ env.RUN_TEST }}
-         if: matrix.os == 'windows-latest'
+           pytest inequality \
+           -v \
+           -r a \
+           -n auto \
+           --color yes \
+           --cov inequality \
+           --cov-report xml \
+           --cov-report term-missing \
+           --cov-append \
+           --doctest-modules
 
        - name: codecov
          uses: codecov/codecov-action@v3

.pre-commit-config.yaml

@@ -1,16 +1,15 @@
+files: "inequality\/"
 repos:
-- repo: https://github.com/pycqa/isort
-  rev: 5.12.0
-  hooks:
-  - id: isort
-    language_version: python3
-- repo: https://github.com/pycqa/flake8
-  rev: 6.1.0
-  hooks:
-  - id: flake8
-    language_version: python3
-- repo: https://github.com/psf/black
-  rev: 23.10.0
-  hooks:
-  - id: black
-    language_version: python3
+  - repo: https://github.com/psf/black
+    rev: "23.10.0"
+    hooks:
+      - id: black
+        language_version: python3
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: "v0.1.2"
+    hooks:
+      - id: ruff
+
+ci:
+  autofix_prs: false
+  autoupdate_schedule: quarterly

README.md

@@ -6,8 +6,6 @@ Spatial Inequality  Analysis in PySAL
 [![codecov](https://codecov.io/gh/pysal/inequality/branch/main/graph/badge.svg)](https://codecov.io/gh/pysal/inequality)
 [![Documentation](https://img.shields.io/static/v1.svg?label=docs&message=current&color=9cf)](http://pysal.org/inequality/)
 
-
-
 Methods for measuring spatial inequality.
 
 

ci/311-DEV.yaml → ci/310-MIN.yaml

@@ -2,10 +2,11 @@ name: test
 channels:
   - conda-forge
 dependencies:
-  - python=3.11
+  - python=3.10
   # required
-  - numpy
-  - scipy
+  - libpysal=4.5
+  - numpy=1.23
+  - scipy=1.8
   # testing
   - pytest
   - pytest-cov