pysam-v0.15.4
Release 0.15.4
Bugfix release. Principal reason for release is to update cython
version in order to fix pip install pysam with python 3.8.
- [#879] Fix add_meta function in libcbcf.pyx, so meta-information
lines in header added with this function have double-quoting rules
in accordance to rules specified in VCF4.2 and VCF4.3 specifications - [#863] Force arg to bytes to support non-ASCII encoding
- [#875] Bump minimum Cython version
- [#868] Prevent segfault on Python 2.7 AlignedSegment.compare(other=None)
- [#867] Fix wheel building on TravisCI
- [#863] Force arg to bytes to support non-ASCII encoding
- [#799] disambiguate interpretation of bcf_read return code
- [#841] Fix silent truncation of FASTQ with bad q strings
- [#846] Prevent segmentation fault on ID, when handling malformed records
- [#829] Run configure with the correct CC/CFLAGS/LDFLAGS env va