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Explicitly permit eg N+m in MM tag (PR#799) #799

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Explicitly permit eg N+m in MM tag (PR#799) #799

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2 changes: 2 additions & 0 deletions SAMtags.tex
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Expand Up @@ -532,6 +532,7 @@ \subsection{Base modifications}

An unmodified base of `{\tt N}' means count any base in {\sf SEQ}, not only those of `{\tt N}'.
Thus `{\tt N+n,100;}' means the 101st base is Xanthosine (n), irrespective of the sequence composition.
A fundamental base of `{\tt N}' may also be used with a base-specific modification code to force the counting to be applied per base rather than per base-type.

The standard code types and their associated ChEBI values are listed
below, taken from Viner {\it et al.}%
Expand Down Expand Up @@ -567,6 +568,7 @@ \subsection{Base modifications}
\hline
N & n & Xao & Xanthosine & 18107 \\
N & N & & Ambiguity code; any mod & \\
N & any & & Mod applied to any base & \\
\end{tabular}
\end{center}

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