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NF: Visualize the latent space#245

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levje wants to merge 32 commits intoscil-vital:masterscil-vital/dwi_ml:masterfrom levje:levje/viz-latent-spacelevje/dwi_ml:levje/viz-latent-spaceCopy head branch name to clipboard

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Commits on Sep 20, 2024

• Latent space visualization integration

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Commits on Sep 27, 2024

• Viz latent space each n epochs

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• autopep8 pass

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• Merge branch 'master' into levje/viz-latent-space

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Commits on Oct 2, 2024

• Merge branch 'master' of github.com:scil-vital/dwi_ml into levje/viz-latent-space

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• Fix to cpu

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• Use bundle index within HDF5 for coloring latent space

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• Subplots with best epoch: part I

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Commits on Oct 3, 2024

• Color matching between epochs and save the plot of the best epoch

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• Fix best epoch legend and colors

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Commits on Oct 4, 2024

• Cleaup data_per_streamline retrieval in the HDF5

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• Cleanup: part 1

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Commits on Oct 5, 2024

• Cleanup: part 2

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• Cleanup: part 3

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Commits on Oct 6, 2024

• Cleanup: part 4

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• Cleanup: part 5

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Commits on Oct 7, 2024

• Fix dps unpacking

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• Fix tests

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• Fix pep8

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• Move color generation func into separate file

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• Doc update

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• Fix missing import

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• input francois code

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• fix import

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Commits on Oct 8, 2024

• pep8

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• remove comment - jeremi review

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• set higher s range and v range

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Commits on Oct 29, 2024

• Merge pull request #1 from arnaudbore/update_color_class

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Commits on Nov 8, 2024

• Merge branch 'master' into levje/viz-latent-space

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• incomplete: stick to master

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• incomplete: stick to master part 2

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• fix: dps batch loading and stick to master 3

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