Update chebi.yml

sec2pri · Jan 30, 2024 · 8e46297 · 8e46297
1 parent a7db446
commit 8e46297
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/.github/workflows/chebi.yml b/.github/workflows/chebi.yml
@@ -105,8 +105,8 @@ jobs:
       - name: Test SDF processing
         id: sdf_process
         run: |
-          inputFile="ChEBI_complete_3star.sdf" #TODO replace by config var
-          outputDir="new/"
+          inputFile="ChEBI_complete_3star.sdf" 
+          outputDir="new/ChEBI_complete_3star.sdf"
           # Run Java program and capture its exit code
           java -cp target/mapping_prerocessing-0.0.1-jar-with-dependencies.jar org.sec2pri.chebi_sdf "$inputFile" "$outputDir"
           # Check the exit status of the Java program