Fix cmake variables. Add file with conda dev requirements.

.github/workflows/testconda.yml

@@ -77,9 +77,7 @@ jobs:
           source ~/conda/etc/profile.d/conda.sh \
             && conda create --yes -n test python==${{ matrix.python }} \
             && conda activate test \
-            && conda install --yes --file requirements.txt \
-              compilers libopenblas=*=*openmp* libblas=*=*openblas openblas=*=*openmp* \
-              boost gsl libflac
+            && conda install --yes --file conda_dev_requirements.txt
 
       - name: Install
         run: |

CMakeLists.txt

@@ -41,12 +41,12 @@ else()
 endif()
 
 # Determine the location of site-packages.
-execute_process(COMMAND ${PYTHON_EXECUTABLE} -c "from distutils.sysconfig import get_python_lib; print(get_python_lib())" OUTPUT_VARIABLE PYTHON_SITE_PACKAGES OUTPUT_STRIP_TRAILING_WHITESPACE)
+execute_process(COMMAND ${Python_EXECUTABLE} -c "from distutils.sysconfig import get_python_lib; print(get_python_lib())" OUTPUT_VARIABLE PYTHON_SITE_PACKAGES OUTPUT_STRIP_TRAILING_WHITESPACE)
 
 # Numpy include directory?
-execute_process(COMMAND ${PYTHON_EXECUTABLE} -c 
+execute_process(COMMAND ${Python_EXECUTABLE} -c
   "import numpy; print(numpy.get_include())"
-  OUTPUT_VARIABLE NUMPY_INCLUDE_DIR 
+  OUTPUT_VARIABLE NUMPY_INCLUDE_DIR
   OUTPUT_STRIP_TRAILING_WHITESPACE
 )
 
@@ -88,8 +88,8 @@ target_link_libraries(so3g PUBLIC spt3g::core)
 target_include_directories(so3g PRIVATE ${GSL_INCLUDE_DIR})
 target_link_libraries(so3g PUBLIC ${GSL_LIBRARIES})
 
-# Link to BLAS.  You probably want to select openblas, so pass 
-# -DBLA_VENDOR=OpenBLAS 
+# Link to BLAS.  You probably want to select openblas, so pass
+# -DBLA_VENDOR=OpenBLAS
 find_package(BLAS REQUIRED)
 if(BLAS_FOUND)
   message("-- BLAS found: ${BLAS_LIBRARIES}")

conda_dev_requirements.txt

@@ -0,0 +1,34 @@
+# This is the set of conda packages needed when creating
+# a development environment for building spt3g / so3g
+# using conda compilers and packages to meet dependencies.
+#
+# For example, assuming you have a conda-forge base environment
+# you can do:
+#
+#  conda create -n dev python==3.12
+#  conda activate dev
+#  conda install --file conda_dev_requirements.txt
+#  python3 -m pip install -vv .
+#
+# Build tools
+compilers
+cmake
+# Compiled dependencies
+libopenblas=*=*openmp*
+libblas=*=*openblas
+openblas=*=*openmp*
+boost
+libflac
+gsl
+# Python dependencies
+numpy
+scipy
+astropy
+matplotlib
+ephem
+pytz
+pyaml
+sqlalchemy
+tqdm
+# Eventually we should make a conda package for these:
+# qpoint

docker/so3g-setup.sh

@@ -1,14 +1,11 @@
 #!/usr/bin/env bash
 
-np_incl=$(python3 -c 'import numpy as np; print(np.get_include())')
-
 mkdir -p build
 cd build
 cmake \
     -DCMAKE_VERBOSE_MAKEFILE=ON \
     -DCMAKE_BUILD_TYPE=Release \
     -DPython_EXECUTABLE=$(which python3) \
-    -DPython_NumPy_INCLUDE_DIRS="${np_incl}" \
     ..
 make -j 2
 make install

setup.py

@@ -287,8 +287,6 @@ def build_cmake(self):
         )
         raw_incl = out.split()[0]
         py_incl = re.sub("-I", "", raw_incl)
-        # Get the numpy include path from numpy
-        np_incl = np.get_include()
         dlist3g = [
             f"-DPython_EXECUTABLE={py_exe}",
             f"-DPython_INCLUDE_DIRS={py_incl}",
@@ -297,8 +295,6 @@ def build_cmake(self):
             f"-DPython_LIBRARY_DIRS=''",
             f"-DPython_VERSION_MAJOR={py_maj}",
             f"-DPython_VERSION_MINOR={py_min}",
-            f"-DPython_NumPy_INCLUDE_DIRS={np_incl}",
-            f"-DBoost_PYTHON_TYPE=python{py_maj}{py_min}",
         ]
         if "BOOST_ROOT" in os.environ:
             dlist3g.append(f"-DBOOST_ROOT={os.environ['BOOST_ROOT']}")

wheels/spt3g_disable_netcdf.patch

@@ -0,0 +1,15 @@
+diff -urN spt3g_software_orig/dfmux/CMakeLists.txt spt3g_software/dfmux/CMakeLists.txt
+--- spt3g_software_orig/dfmux/CMakeLists.txt	2025-01-06 11:29:16.606854658 -0800
++++ spt3g_software/dfmux/CMakeLists.txt	2025-01-07 10:15:20.506190895 -0800
+@@ -1,5 +1,9 @@
+-find_package(NetCDF MODULE)
+-find_package(HDF5)
++if(NOT DISABLE_NETCDF)
++    find_package(NetCDF MODULE)
++endif()
++if(NOT DISABLE_HDF5)
++    find_package(HDF5)
++endif()
+ if (NetCDF_FOUND AND HDF5_FOUND)
+ 	set(DFMUX_LIB_EXTRA_SRC src/NetCDFDump.cxx)
+ else()