Please note, this is just meant to be a PoC repo. Please DO NOT use it in production.

LiteratureReviewBot

Create a bot that scans pubmed literature and github for publications related to a topic and summarizes them in a table.

Dependencies

You'll need to have an Ollama installed on your machine. You can download it by going here. Once you have it installed you can download the LLama3.1 model by running the following command:

ollama pull llama3.1

Create a new virtual environment and install the dependencies by running the following commands:

conda create -n litrevbot python=3.12
pip install pipx
pipx install poetry
conda activate litrevbot
poetry install .

Usage

To run the bot, you can use the following command:

conda activate litrevbot
python -m streamlit run app.py