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Porting UFS-WM Noah-MP GSWP3 baseline to land DA workflow #32

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merged 69 commits into from
Nov 24, 2023
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5a22db7
update gitmodules
rhaesung Sep 15, 2023
cbab24f
update vector2tile
rhaesung Sep 15, 2023
3a1bd75
add template.tile2tile
rhaesung Sep 21, 2023
65d42a1
remove vector2tile submodule
rhaesung Sep 21, 2023
97309ba
delete template for vector2tile
rhaesung Sep 21, 2023
693e514
update .gitmodules
rhaesung Sep 21, 2023
602eba8
update CMakeLists.txt
rhaesung Sep 21, 2023
92f89d9
add tile2tile submodule
rhaesung Sep 21, 2023
7e3dc45
update submit_cycle.sh
rhaesung Sep 21, 2023
6fcd4d1
update DA_update
rhaesung Sep 21, 2023
2678691
update submit_cycle.sh
rhaesung Sep 21, 2023
55e2b89
Update Jenkinsfile adding sonarqube
zach1221 Oct 18, 2023
fd3c5cb
add jedi2ufs conversion feature
rhaesung Oct 24, 2023
1ba1ff5
add ufs2jedi and jedi2ufs tile conversion
rhaesung Oct 24, 2023
8a56f97
remove unnecessary templates
rhaesung Oct 24, 2023
6f79b50
add new tile2tile templates
rhaesung Oct 24, 2023
a33cea7
Merge branch 'feature/porting' of https://github.com/ufs-community/la…
rhaesung Oct 24, 2023
04b7afa
turn on the ufs-weather-model
rhaesung Oct 25, 2023
77e9c4b
add the UFS Noah MP run feature
rhaesung Nov 2, 2023
518c8f6
increse cpus per task from 1 to 2
rhaesung Nov 2, 2023
4436a2d
update the location of restart files in 'fv3_run'
rhaesung Nov 6, 2023
78f498a
increase cpus per tasks from 2 to 5
rhaesung Nov 6, 2023
6d4528a
add vector2tile submodule again
rhaesung Nov 9, 2023
2dc77eb
update CMakeLists.txt
rhaesung Nov 9, 2023
92afb17
add vec2tile again
rhaesung Nov 9, 2023
aef338c
adding the offline noah-mp feature with era5 forcing
rhaesung Nov 13, 2023
3f3a3b2
add vec2tile/tile2vec templates
rhaesung Nov 13, 2023
1786c93
add settings_DA_cycle_gswp3
rhaesung Nov 13, 2023
714728c
add back the offline noah-mp option with era5 forcing
rhaesung Nov 13, 2023
478d635
add the fake_observations
rhaesung Nov 14, 2023
1b51eea
update the gitmodules
rhaesung Nov 14, 2023
d094dd8
update do_subnit_cycle.sh
rhaesung Nov 14, 2023
b1c72bd
update settings for era5
rhaesung Nov 14, 2023
b225210
update settings for gswp3
rhaesung Nov 14, 2023
8787552
Read in customized UFS datm_cdeps_lnd_gswp3_rst RT script and add wri…
rhaesung Nov 14, 2023
b6eb14f
update file names from nems to ufs
rhaesung Nov 15, 2023
1980229
revert to the default offline-noahmp/era5 setting
rhaesung Nov 15, 2023
07fb73a
Update Jenkinsfile jenkins workspace
zach1221 Nov 15, 2023
bd4298a
remove tile2tile submodule
rhaesung Nov 15, 2023
822b8ab
Merge branch 'feature/porting' of https://github.com/ufs-community/la…
rhaesung Nov 15, 2023
605b71a
update the RT path on Orion
rhaesung Nov 17, 2023
a2a1023
update the GHCN path
rhaesung Nov 18, 2023
a24962a
Update landda_orion.intel.lua
jkbk2004 Nov 20, 2023
599258f
change the RT path of Orion.
rhaesung Nov 21, 2023
cc75570
Create orion_ctest.sh
zach1221 Nov 21, 2023
bc598fd
Update Jenkinsfile to add orion
zach1221 Nov 21, 2023
4f659c8
Rename run_ctest.sh to run_hera_ctest.sh
zach1221 Nov 21, 2023
4546ff3
Create run_orion_ctest.sh
zach1221 Nov 21, 2023
3faea14
Delete test/testinput/run_orion_ctest.sh
zach1221 Nov 21, 2023
7a146e9
Create run_orion_ctest.sh
zach1221 Nov 21, 2023
5d177e4
Update Jenkinsfile add orion scripts
zach1221 Nov 21, 2023
9045da9
Update Jenkinsfile
zach1221 Nov 21, 2023
59d0c04
Update Jenkinsfile
zach1221 Nov 21, 2023
5d70a7f
add mchine_id option in setting
rhaesung Nov 21, 2023
fe3d9b8
clean up the machine_ID
rhaesung Nov 21, 2023
672b1da
clean up
rhaesung Nov 21, 2023
1f23540
Merge branch 'feature/porting' of https://github.com/ufs-community/la…
rhaesung Nov 21, 2023
e4b8537
Update run_orion_ctest.sh fix orion account
zach1221 Nov 21, 2023
b3908b6
add datm_cdeps_lnd_gswp3_rst file in the cycle directory
rhaesung Nov 21, 2023
d1ac907
clean up
rhaesung Nov 21, 2023
dce0a04
Merge branch 'feature/porting' of https://github.com/ufs-community/la…
rhaesung Nov 21, 2023
ff665b4
adding back the machine_ID for ctest
rhaesung Nov 21, 2023
3723353
Update Jenkinsfile
zach1221 Nov 21, 2023
3c74eec
orion_ctest.sh permissions
zach1221 Nov 21, 2023
f16ac05
run_orion_ctest.sh permissions
zach1221 Nov 21, 2023
0bd3c33
Update run_orion_ctest.sh
zach1221 Nov 21, 2023
6411436
Update run_orion_ctest.sh
zach1221 Nov 22, 2023
59f3064
Update Jenkinsfile
zach1221 Nov 22, 2023
ea623d9
remove README for tile2tile
rhaesung Nov 22, 2023
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update submit_cycle.sh
rhaesung committed Sep 21, 2023

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commit 7e3dc450b200ade9c77557e0a82281f6d2629d75
17 changes: 10 additions & 7 deletions do_submit_cycle.sh
Original file line number Diff line number Diff line change
@@ -75,10 +75,10 @@ fi
############################
# set executables

if [[ -e ${BUILDDIR}/bin/vector2tile_converter.exe ]]; then #prefer cmake-built executables
export vec2tileexec=${BUILDDIR}/bin/vector2tile_converter.exe
if [[ -e ${BUILDDIR}/bin/tile2tile_converter.exe ]]; then #prefer cmake-built executables
export tile2tileexec=${BUILDDIR}/bin/tile2tile_converter.exe
else
export vec2tileexec=${CYCLEDIR}/vector2tile/vector2tile_converter.exe
export tile2tileexec=${CYCLEDIR}/tile2tile/tile2tile_converter.exe
fi
if [[ -e ${BUILDDIR}/bin/ufsLand.exe ]]; then
export LSMexec=${BUILDDIR}/bin/ufsLand.exe
@@ -154,10 +154,12 @@ fi
ln -sf ${MEM_MODL_OUTDIR}/noahmp ${MEM_WORKDIR}/noahmp_output

# copy ICS into restarts, if needed
rst_out=${MEM_MODL_OUTDIR}/restarts/vector/ufs_land_restart_back.${sYYYY}-${sMM}-${sDD}_${sHH}-00-00.nc
rst_in=${LANDDA_INPUTS}/restarts/${atmos_forc}/ufs_land_restart.${sYYYY}-${sMM}-${sDD}_${sHH}-00-00.nc
for tile in 1 2 3 4 5 6
do
rst_out=${MEM_MODL_OUTDIR}/restarts/tile/ufs_land_restart_back.${sYYYY}-${sMM}-${sDD}_${sHH}-00-00.tile${tile}.nc
rst_in=${LANDDA_INPUTS}/restarts/${atmos_forc}/ufs_land_restart.${sYYYY}-${sMM}-${sDD}_${sHH}-00-00.tile${tile}.nc
# if restart not in experiment out directory, copy the restarts from the ICSDIR
if [[ ! -e ${rst_out} ]]; then
if [[ ! -e ${rst_out} ]]; then
echo "Looking for ICS: ${rst_in}"
if [[ -e ${rst_in} ]]; then
echo "ICS found, copying"
@@ -166,7 +168,8 @@ if [[ ! -e ${rst_out} ]]; then
echo "ICS not found. Exiting"
exit 10
fi
fi
fi
done

# create dates file
touch analdates.sh