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adds version macros for segmetrics tool #88

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merged 2 commits into from
Nov 14, 2023
Merged

adds version macros for segmetrics tool #88

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8ab2ac6
adds zenodo citation to segmetrics tool
kostrykin Nov 11, 2023
8eb6422
removes zenodo reference, adds version macros
kostrykin Nov 11, 2023
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3 changes: 2 additions & 1 deletion tools/segmetrics/segmetrics.xml
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<tool id="ip_segmetrics" name="Compute image segmentation and object detection performance measures" version="1.4.0-2" profile="20.05">
<tool id="ip_segmetrics" name="Compute image segmentation and object detection performance measures" version="1.4.0+galaxy3" profile="20.05">
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<description>with SegMetrics</description>
<edam_operations>
<edam_operation>operation_3443</edam_operation>
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If all objects within your segmented images are *uniquely* labeled, you can turn on the "Segmentation is uniquely labeled" switch to speed up the computations. Leave it off otherwise, or if you are unsure. The same accounts for the "Ground truth is uniquely labeled" switch and your ground turth image data.
</help>
<citations>
<citation type="doi">10.5281/zenodo.10111958</citation>
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<citation type="doi">10.1093/bioinformatics/btu080</citation>
<citation type="doi">10.1109/ISBI.2009.5193098</citation>
<citation type="doi">10.1109/ICIP.2003.1246871</citation>
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