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Poetry and pipenv install instructions #299

Merged
merged 12 commits into from
Aug 8, 2023
8 changes: 7 additions & 1 deletion .gitignore
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Expand Up @@ -106,7 +106,7 @@ ipython_config.py
# However, in case of collaboration, if having platform-specific dependencies or dependencies
# having no cross-platform support, pipenv may install dependencies that don't work, or not
# install all needed dependencies.
#Pipfile.lock
Pipfile.lock

# PEP 582; used by e.g. github.com/David-OConnor/pyflow
__pypackages__/
Expand Down Expand Up @@ -146,3 +146,9 @@ dmypy.json
.pyre/

report-*

# poetry lock file
poetry.lock

*.zip
.DS_Store
71 changes: 71 additions & 0 deletions Pipfile
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@@ -0,0 +1,71 @@
[[source]]
url = "https://pypi.org/simple"
verify_ssl = true
name = "pypi"

[packages]
aiohttp = ">=3.8"
chocolate = ">=0.0.2"
csvwlib = ">=0.3.2"
cryptography = ">=35.0"
decorator = ">=5.1"
fsspec = {version = ">=2022.2", extras = ["gs", "s3"]}
gcsfs = ">=2022.2"
icecream = ">=2.1"
morph-kgc = ">=2.0.0"
networkx = ">=2.7"
numpy = ">=1.23.0"
owlrl = ">=6.0.2"
oxrdflib = ">=0.3.1"
pandas = ">=1.4"
pslpython = ">=2.2.2"
pyarrow = ">=7.0"
pynvml = ">=11.4"
pyshacl = ">=0.18"
python-dateutil = ">=2.8"
pyvis = ">=0.1.9"
rdflib = ">=6.1"
requests = ">=2.27"
scikit-learn = "==1.1.2"
scipy = ">=1.8.0"
statsmodels = ">=0.13"
tqdm = ">=4.63"
urlpath = ">=1.2"

[dev-packages]
black = "*"
bandit = ">=1.7"
codespell = ">=2.1"
coverage = ">=6.3"
flask = ">=2.0"
grayskull = ">=1.1"
jupyterlab = ">=3.3"
mistune = ">=0.8"
mkdocs-git-revision-date-plugin = ">=0.3"
mkdocs-material = ">=8.2"
mknotebooks = ">=0.7"
mypy = ">=0.940"
nbconvert = ">=6.4"
nbmake = ">=1.3"
notebook = ">=6.4"
pipdeptree = ">=2.2"
pre-commit = ">=2.17"
pygments = ">=2.11"
pylint = ">=2.12"
pymdown-extensions = ">=9.2"
pytest = ">=7.1"
responses = ">=0.19"
scikit-learn = ">=1.0"
selenium = ">=4.1"
twine = ">=3.8"
types-python-dateutil = ">=2.8"
types-requests = ">=2.27"
xmltodict = ">=0.12"

[requires]
# python_version = "3.11"
# python_version = "3.10"
# python_version = "3.9"
# python_version = "3.8"
# python_version = "3.7"
# python_version = "3"
39 changes: 38 additions & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -38,18 +38,55 @@ Morph-KGC, pythonPSL, and many more.
See the ["Getting Started"](https://derwen.ai/docs/kgl/start/)
section of the online documentation.

We recommend installing from [PyPi](https://pypi.python.org/pypi/kglab):
## Useing kglab as a package for your project

### We recommend installing from [PyPi](https://pypi.python.org/pypi/kglab):

#### pip
```bash
python3 -m pip install kglab
```

#### pipenv
Kglab supports python 3.7 and above.
You will need to specify the python version in your Pipfile or whne creating the pipenv
If you have specified the python version in your Pipfile, you can install kglab with:
```bash
pipenv install kglab
```

If you have not specified the python version in your Pipfile, you can install kglab with:
```bash
pipenv install --python 3.7 kglab
```

#### poetry
You can install into you existing poetry project with:
```bash
potery add kglab
```

#### conda
```bash
conda env create -n kglab
conda activate kglab
pip install kglab
```

### Or, install from source:
If you work directly from this Git repo, be sure to install the
dependencies:
#### pip
```bash
python3 -m pip install -U pip wheel
python3 -m pip install -r requirements.txt
```

#### pipenv
```bash
pipenv install --dev
# NEED TO HAVE a Pipfile
```
Alternatively, to install dependencies using `conda`:
```bash
conda env create -f environment.yml --force
Expand Down
110 changes: 110 additions & 0 deletions pyproject.toml
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[build-system]
requires = ["flit_core >=3.2,<4"]
build-backend = "flit_core.buildapi"

[project]
name = "kglab"
authors = [
{name = "Paco Nathan", email = "[email protected]"}
]
description = "A simple abstraction layer in Python for building knowledge graphs"
readme = "README.md"
license = {file = "LICENSE"}
requires-python = ">=3.7"
dependencies = [
"aiohttp >= 3.8",
"chocolate >= 0.0.2",
"csvwlib >= 0.3.2",
"cryptography >= 35.0",
"decorator >= 5.1",
"fsspec[gs,s3] >= 2022.2",
"gcsfs >= 2022.2",
"icecream >= 2.1",
"morph-kgc >= 2.0.0",
"networkx >= 2.7",
"numpy >= 1.23.0",
"owlrl >= 6.0.2",
"oxrdflib >= 0.3.1",
"pandas >= 1.4",
"pslpython >= 2.2.2",
"pyarrow >= 7.0",
"pynvml >= 11.4",
"pyshacl >= 0.18",
"python-dateutil >= 2.8",
"pyvis >= 0.1.9",
"rdflib >= 6.1",
"requests >= 2.27",
"scikit-learn == 1.1.3",
"scipy >= 1.8.0",
"statsmodels >= 0.13",
"tqdm >= 4.63",
"urlpath >= 1.2",
]
classifiers = [
"Development Status :: 5 - Production/Stable",
"Intended Audience :: Developers",
"Intended Audience :: Education",
"Intended Audience :: Information Technology",
"Intended Audience :: Science/Research",
"License :: OSI Approved :: MIT License",
"Operating System :: OS Independent",
"Programming Language :: Python :: 3 :: Only",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.7",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python",
"Topic :: Scientific/Engineering :: Artificial Intelligence",
"Topic :: Scientific/Engineering :: Human Machine Interfaces",
"Topic :: Scientific/Engineering :: Information Analysis",
"Topic :: Software Development :: Libraries :: Python Modules",
"Topic :: Text Processing :: Indexing",
]
keywords = [
"controlled vocabulary",
"cugraph",
"deep learning",
"embedding",
"gpu",
"graph algorithms",
"igraph",
"inference",
"interactive visualization",
"json-ld",
"knowledge graph",
"managing namespaces",
"morph-kgc",
"n3",
"networkx",
"owl",
"pandas",
"parquet",
"probabilistic soft logic",
"psl",
"pyvis",
"rapids",
"rdf",
"rml",
"roam research",
"serialization",
"shacl",
"skos",
"sparql",
"statistical relational learning",
"topology",
"turtle",
"validation",
]
dynamic = ["version"]

[project.urls]
Home = "https://derwen.ai/docs/kgl/"
DOI = "https://doi.org/10.5281/zenodo.6360664"
Discussions = "https://www.linkedin.com/groups/6725785/"
DockerHub = "https://hub.docker.com/r/derwenai/kglab"
Tutorial = "https://derwen.ai/docs/kgl/tutorial/"
Issues = "https://github.com/DerwenAI/kglab/issues"
Source = "https://github.com/DerwenAI/kglab"

[project.entry-points."rdf.plugins.store"]
kglab = "kglab:PropertyStore"