Skip to content

Commit

Permalink
deploy: 390fc8a
Browse files Browse the repository at this point in the history
  • Loading branch information
PeerHerholz committed Oct 25, 2024
1 parent 4004850 commit 1ec8a05
Show file tree
Hide file tree
Showing 16 changed files with 419 additions and 466 deletions.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file not shown.
Binary file not shown.
Binary file not shown.
2 changes: 1 addition & 1 deletion _sources/intro.md
Original file line number Diff line number Diff line change
Expand Up @@ -58,7 +58,7 @@ More information and their application can be found in the respective sections o
:link: https://main-educational.github.io/brain_encoding_decoding/haxby_data.html
**An overview of the Haxby Dataset**
^^^
```{image} https://main-educational.github.io/brain_encoding_decoding/_images/d3731383fc66953ff04a680a4d6671e6cfbaa19d6fda5f0089239e37c384ac71.png
```{image} https://main-educational.github.io/brain_encoding_decoding/_images/e7ee3822777de29b4978b40bd5d14627bd5d68417d8daea46364bd5f0662b01b.png
:height: 100
```

Expand Down
427 changes: 197 additions & 230 deletions _sources/mlp_decoding.ipynb

Large diffs are not rendered by default.

104 changes: 52 additions & 52 deletions _sources/svm_decoding.ipynb

Large diffs are not rendered by default.

5 changes: 1 addition & 4 deletions encoding.html
Original file line number Diff line number Diff line change
Expand Up @@ -542,10 +542,7 @@ <h2>Loading the data<a class="headerlink" href="#loading-the-data" title="Link t
Downloading data from https://www.nitrc.org/frs/download.php/8486/miyawaki2008.tgz ...
</pre></div>
</div>
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Downloaded 120397824 of 161069109 bytes (74.7%, 0.3s remaining)
</pre></div>
</div>
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span> ...done. (2 seconds, 0 min)
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span> ...done. (1 seconds, 0 min)
Extracting data from /home/runner/nilearn_data/miyawaki2008/18b67c55cebe5e71427c5ffdcfafd948/miyawaki2008.tgz...
</pre></div>
</div>
Expand Down
13 changes: 6 additions & 7 deletions gcn_decoding.html
Original file line number Diff line number Diff line change
Expand Up @@ -510,28 +510,27 @@ <h2>Getting the data<a class="headerlink" href="#getting-the-data" title="Link t
Dataset created in ../data/haxby2001

Downloading data from https://www.nitrc.org/frs/download.php/7868/mask.nii.gz ...
Downloading data from http://data.pymvpa.org/datasets/haxby2001/MD5SUMS ...
</pre></div>
</div>
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span> ...done. (0 seconds, 0 min)
</pre></div>
</div>
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span> ...done. (0 seconds, 0 min)
<div class="output stream highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Downloading data from http://data.pymvpa.org/datasets/haxby2001/MD5SUMS ...
</pre></div>
</div>
<div class="output stream highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Downloading data from http://data.pymvpa.org/datasets/haxby2001/subj4-2010.01.14.tar.gz ...
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span> ...done. (0 seconds, 0 min)
</pre></div>
</div>
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Downloaded 71909376 of 329954386 bytes (21.8%, 3.7s remaining)
<div class="output stream highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Downloading data from http://data.pymvpa.org/datasets/haxby2001/subj4-2010.01.14.tar.gz ...
</pre></div>
</div>
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Downloaded 166133760 of 329954386 bytes (50.4%, 2.0s remaining)
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Downloaded 113999872 of 329954386 bytes (34.6%, 1.9s remaining)
</pre></div>
</div>
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Downloaded 260833280 of 329954386 bytes (79.1%, 0.8s remaining)
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Downloaded 251142144 of 329954386 bytes (76.1%, 0.6s remaining)
</pre></div>
</div>
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span> ...done. (4 seconds, 0 min)
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span> ...done. (3 seconds, 0 min)
</pre></div>
</div>
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Extracting data from ../data/haxby2001/622d4f5d4b8f14a567901606c924e90d/subj4-2010.01.14.tar.gz...
Expand Down
6 changes: 3 additions & 3 deletions haxby_data.html
Original file line number Diff line number Diff line change
Expand Up @@ -1642,7 +1642,7 @@ <h3>Neuroimaging files<a class="headerlink" href="#neuroimaging-files" title="Li
</div>
</div>
<div class="cell_output docutils container">
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;nilearn.plotting.displays._slicers.OrthoSlicer at 0x7ff50eab4610&gt;
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;nilearn.plotting.displays._slicers.OrthoSlicer at 0x7f0b9cbd7650&gt;
</pre></div>
</div>
<img alt="_images/3c2e26146e29b855792c4d733bf847176f0b0773894537d73ef17ebe3a638766.png" src="_images/3c2e26146e29b855792c4d733bf847176f0b0773894537d73ef17ebe3a638766.png" />
Expand Down Expand Up @@ -2151,7 +2151,7 @@ <h3>Neuroimaging files<a class="headerlink" href="#neuroimaging-files" title="Li
</div>
</div>
<div class="cell_output docutils container">
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;nilearn.plotting.displays._slicers.OrthoSlicer at 0x7ff50eab5e10&gt;
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;nilearn.plotting.displays._slicers.OrthoSlicer at 0x7f0b9cb78250&gt;
</pre></div>
</div>
<img alt="_images/5269164b72a8b290771534a1cf48be42623de3b734d5d5dedd54a1d4fced23e0.png" src="_images/5269164b72a8b290771534a1cf48be42623de3b734d5d5dedd54a1d4fced23e0.png" />
Expand Down Expand Up @@ -2626,7 +2626,7 @@ <h3>Neuroimaging files<a class="headerlink" href="#neuroimaging-files" title="Li
</div>
</div>
<div class="cell_output docutils container">
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;nilearn.plotting.displays._slicers.OrthoSlicer at 0x7ff50e9a1310&gt;
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;nilearn.plotting.displays._slicers.OrthoSlicer at 0x7f0b9aa31210&gt;
</pre></div>
</div>
<img alt="_images/0956cb496715481247a5e3db1598ed822a4858bb5fbf397163396d3d28e52b26.png" src="_images/0956cb496715481247a5e3db1598ed822a4858bb5fbf397163396d3d28e52b26.png" />
Expand Down
2 changes: 1 addition & 1 deletion intro.html
Original file line number Diff line number Diff line change
Expand Up @@ -459,7 +459,7 @@ <h2>Brain decoding vs. encoding<a class="headerlink" href="#brain-decoding-vs-en
<p class="sd-card-text"><strong>An overview of the Haxby Dataset</strong></p>
</div>
<div class="sd-card-body text-center docutils">
<a class="reference internal image-reference" href="https://main-educational.github.io/brain_encoding_decoding/_images/d3731383fc66953ff04a680a4d6671e6cfbaa19d6fda5f0089239e37c384ac71.png"><img alt="https://main-educational.github.io/brain_encoding_decoding/_images/d3731383fc66953ff04a680a4d6671e6cfbaa19d6fda5f0089239e37c384ac71.png" src="https://main-educational.github.io/brain_encoding_decoding/_images/d3731383fc66953ff04a680a4d6671e6cfbaa19d6fda5f0089239e37c384ac71.png" style="height: 100px;" /></a>
<a class="reference internal image-reference" href="https://main-educational.github.io/brain_encoding_decoding/_images/e7ee3822777de29b4978b40bd5d14627bd5d68417d8daea46364bd5f0662b01b.png"><img alt="https://main-educational.github.io/brain_encoding_decoding/_images/e7ee3822777de29b4978b40bd5d14627bd5d68417d8daea46364bd5f0662b01b.png" src="https://main-educational.github.io/brain_encoding_decoding/_images/e7ee3822777de29b4978b40bd5d14627bd5d68417d8daea46364bd5f0662b01b.png" style="height: 100px;" /></a>
<p class="sd-card-text">Explore and prepare the tutorial dataset.</p>
</div>
<div class="sd-card-footer docutils">
Expand Down
Loading

0 comments on commit 1ec8a05

Please sign in to comment.