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Dummy PR for testing nf-test on random nf-module
nf-core linting #6994: Pull request #1774 opened by asp8200
January 16, 2025 09:29 2m 28s asp8200:dummy_pr_for_nf_test
January 16, 2025 09:29 2m 28s
Implemented MSISENSORPRO tumor-only analysis
nf-core linting #6993: Pull request #1737 synchronize by bounlu
January 16, 2025 02:11 1m 4s bounlu:MSI_tumor_only
January 16, 2025 02:11 1m 4s
Implemented TMB score calculation
nf-core linting #6992: Pull request #1738 synchronize by bounlu
January 16, 2025 02:08 59s bounlu:TMB
January 16, 2025 02:08 59s
Implemented TMB score calculation
nf-core linting #6991: Pull request #1738 synchronize by bounlu
January 16, 2025 02:03 1m 11s bounlu:TMB
January 16, 2025 02:03 1m 11s
Add files via upload - Posters using Sarek
nf-core linting #6990: Pull request #1773 opened by mlfalco-bioinfo
January 15, 2025 17:22 Action required mlfalco-bioinfo:master
January 15, 2025 17:22 Action required
Add deepsomatic tool
nf-core linting #6989: Pull request #1647 synchronize by vaxyzek
January 14, 2025 18:03 Action required vaxyzek:deepsomatic
January 14, 2025 18:03 Action required
Add deepsomatic tool
nf-core linting #6988: Pull request #1647 synchronize by vaxyzek
January 14, 2025 18:02 Action required vaxyzek:deepsomatic
January 14, 2025 18:02 Action required
Finally merge in Sarek bcftools normalization (#1682)
nf-core linting #6987: Pull request #1770 opened by maxulysse
January 13, 2025 13:45 2m 38s dev_normalization
January 13, 2025 13:45 2m 38s
Sarek bcftools normalization
nf-core linting #6986: Pull request #1682 synchronize by Patricie34
January 13, 2025 07:22 2m 37s Patricie34:sarek_bcftools_norm
January 13, 2025 07:22 2m 37s
POC: references usage in CI
nf-core linting #6985: Pull request #1769 synchronize by maxulysse
January 10, 2025 13:48 2m 28s maxulysse:references
January 10, 2025 13:48 2m 28s
POC: references usage in CI
nf-core linting #6984: Pull request #1769 synchronize by maxulysse
January 10, 2025 13:39 2m 36s maxulysse:references
January 10, 2025 13:39 2m 36s
POC: references usage in CI
nf-core linting #6983: Pull request #1769 opened by maxulysse
January 10, 2025 13:34 2m 39s maxulysse:references
January 10, 2025 13:34 2m 39s
Add deepsomatic tool
nf-core linting #6982: Pull request #1647 synchronize by vaxyzek
January 9, 2025 16:11 Action required vaxyzek:deepsomatic
January 9, 2025 16:11 Action required
Add deepsomatic tool
nf-core linting #6981: Pull request #1647 synchronize by vaxyzek
January 9, 2025 15:29 Action required vaxyzek:deepsomatic
January 9, 2025 15:29 Action required
Add deepsomatic tool
nf-core linting #6980: Pull request #1647 synchronize by vaxyzek
January 9, 2025 14:40 Action required vaxyzek:deepsomatic
January 9, 2025 14:40 Action required
Merge pull request #1767 from FriederikeHanssen/nfschema
nf-core linting #6979: Commit 73cacd5 pushed by FriederikeHanssen
January 8, 2025 09:36 2m 34s dev
dev
January 8, 2025 09:36 2m 34s
Bump schema version to 2.2.1
nf-core linting #6978: Pull request #1767 synchronize by FriederikeHanssen
January 8, 2025 09:34 2m 32s FriederikeHanssen:nfschema
January 8, 2025 09:34 2m 32s
Bump schema version to 2.2.1
nf-core linting #6977: Pull request #1767 synchronize by maxulysse
January 8, 2025 09:31 2m 30s FriederikeHanssen:nfschema
January 8, 2025 09:31 2m 30s
Sarek bcftools normalization
nf-core linting #6976: Pull request #1682 synchronize by Patricie34
January 8, 2025 07:09 2m 43s Patricie34:sarek_bcftools_norm
January 8, 2025 07:09 2m 43s
feat: add MuSE as new somatic variant caller
nf-core linting #6975: Pull request #1744 synchronize by famosab
January 7, 2025 13:50 2m 32s famosab:muse
January 7, 2025 13:50 2m 32s
feat: add MuSE as new somatic variant caller
nf-core linting #6974: Pull request #1744 synchronize by famosab
January 7, 2025 12:08 2m 26s famosab:muse
January 7, 2025 12:08 2m 26s
Sarek bcftools normalization
nf-core linting #6973: Pull request #1682 synchronize by Patricie34
December 18, 2024 09:36 2m 32s Patricie34:sarek_bcftools_norm
December 18, 2024 09:36 2m 32s
Sarek bcftools normalization
nf-core linting #6972: Pull request #1682 synchronize by Patricie34
December 18, 2024 05:42 2m 19s Patricie34:sarek_bcftools_norm
December 18, 2024 05:42 2m 19s
Sarek bcftools normalization
nf-core linting #6971: Pull request #1682 synchronize by Patricie34
December 18, 2024 05:33 2m 41s Patricie34:sarek_bcftools_norm
December 18, 2024 05:33 2m 41s
feat: Add linting of FASTQ with FQ/LINT
nf-core linting #6970: Pull request #1763 synchronize by adamrtalbot
December 17, 2024 17:28 2m 32s adamrtalbot:add_fq_lint_to_pipeline
December 17, 2024 17:28 2m 32s