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Dummy PR for testing nf-test on random nf-module
pytest-workflow #254: Pull request #1774 opened by asp8200
January 16, 2025 09:29 22s asp8200:dummy_pr_for_nf_test
January 16, 2025 09:29 22s
Implemented MSISENSORPRO tumor-only analysis
pytest-workflow #253: Pull request #1737 synchronize by bounlu
January 16, 2025 02:11 22m 45s bounlu:MSI_tumor_only
January 16, 2025 02:11 22m 45s
Implemented TMB score calculation
pytest-workflow #252: Pull request #1738 synchronize by bounlu
January 16, 2025 02:08 22m 59s bounlu:TMB
January 16, 2025 02:08 22m 59s
Implemented TMB score calculation
pytest-workflow #251: Pull request #1738 synchronize by bounlu
January 16, 2025 02:03 5m 18s bounlu:TMB
January 16, 2025 02:03 5m 18s
Add files via upload - Posters using Sarek
pytest-workflow #250: Pull request #1773 opened by mlfalco-bioinfo
January 15, 2025 17:22 Action required mlfalco-bioinfo:master
January 15, 2025 17:22 Action required
Add deepsomatic tool
pytest-workflow #249: Pull request #1647 synchronize by vaxyzek
January 14, 2025 18:03 Action required vaxyzek:deepsomatic
January 14, 2025 18:03 Action required
Add deepsomatic tool
pytest-workflow #248: Pull request #1647 synchronize by vaxyzek
January 14, 2025 18:02 Action required vaxyzek:deepsomatic
January 14, 2025 18:02 Action required
Finally merge in Sarek bcftools normalization (#1682)
pytest-workflow #247: Pull request #1770 opened by maxulysse
January 13, 2025 13:45 11m 3s dev_normalization
January 13, 2025 13:45 11m 3s
Sarek bcftools normalization
pytest-workflow #246: Pull request #1682 synchronize by Patricie34
January 13, 2025 07:22 21m 34s Patricie34:sarek_bcftools_norm
January 13, 2025 07:22 21m 34s
POC: references usage in CI
pytest-workflow #245: Pull request #1769 synchronize by maxulysse
January 10, 2025 13:48 12m 12s maxulysse:references
January 10, 2025 13:48 12m 12s
POC: references usage in CI
pytest-workflow #244: Pull request #1769 synchronize by maxulysse
January 10, 2025 13:39 9m 23s maxulysse:references
January 10, 2025 13:39 9m 23s
POC: references usage in CI
pytest-workflow #243: Pull request #1769 opened by maxulysse
January 10, 2025 13:34 5m 33s maxulysse:references
January 10, 2025 13:34 5m 33s
Add deepsomatic tool
pytest-workflow #242: Pull request #1647 synchronize by vaxyzek
January 9, 2025 16:11 Action required vaxyzek:deepsomatic
January 9, 2025 16:11 Action required
Add deepsomatic tool
pytest-workflow #241: Pull request #1647 synchronize by vaxyzek
January 9, 2025 15:29 Action required vaxyzek:deepsomatic
January 9, 2025 15:29 Action required
Add deepsomatic tool
pytest-workflow #240: Pull request #1647 synchronize by vaxyzek
January 9, 2025 14:40 Action required vaxyzek:deepsomatic
January 9, 2025 14:40 Action required
Bump schema version to 2.2.1
pytest-workflow #239: Pull request #1767 synchronize by FriederikeHanssen
January 8, 2025 09:34 22s FriederikeHanssen:nfschema
January 8, 2025 09:34 22s
Bump schema version to 2.2.1
pytest-workflow #238: Pull request #1767 synchronize by maxulysse
January 8, 2025 09:31 22s FriederikeHanssen:nfschema
January 8, 2025 09:31 22s
Sarek bcftools normalization
pytest-workflow #237: Pull request #1682 synchronize by Patricie34
January 8, 2025 07:09 12m 14s Patricie34:sarek_bcftools_norm
January 8, 2025 07:09 12m 14s
feat: add MuSE as new somatic variant caller
pytest-workflow #236: Pull request #1744 synchronize by famosab
January 7, 2025 13:50 45m 24s famosab:muse
January 7, 2025 13:50 45m 24s
feat: add MuSE as new somatic variant caller
pytest-workflow #235: Pull request #1744 synchronize by famosab
January 7, 2025 12:08 44m 0s famosab:muse
January 7, 2025 12:08 44m 0s
Sarek bcftools normalization
pytest-workflow #234: Pull request #1682 synchronize by Patricie34
December 18, 2024 09:36 18m 41s Patricie34:sarek_bcftools_norm
December 18, 2024 09:36 18m 41s
Sarek bcftools normalization
pytest-workflow #233: Pull request #1682 synchronize by Patricie34
December 18, 2024 05:42 12m 30s Patricie34:sarek_bcftools_norm
December 18, 2024 05:42 12m 30s
Sarek bcftools normalization
pytest-workflow #232: Pull request #1682 synchronize by Patricie34
December 18, 2024 05:33 9m 9s Patricie34:sarek_bcftools_norm
December 18, 2024 05:33 9m 9s
feat: Add linting of FASTQ with FQ/LINT
pytest-workflow #231: Pull request #1763 synchronize by adamrtalbot
December 17, 2024 17:28 19s adamrtalbot:add_fq_lint_to_pipeline
December 17, 2024 17:28 19s