Skip to content

Issues: rgcgithub/regenie

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

105 Open 467 Closed
105 Open 467 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

ADD model
#588 opened Dec 30, 2024 by xx3411
1
how to limit the number of variants used in step 1
#587 opened Dec 24, 2024 by shengqh
6
Segmentation fault error in fitting step 1 with time-to-event analysis in regenie v4.0
#585 opened Dec 16, 2024 by kevkevin13
4
Regenie ERROR: all individuals have missing/invalid values for all traits.
#584 opened Dec 16, 2024 by hmseagle
1
VC tests on singleton masks & threshold for number of variants per mask
#583 opened Dec 13, 2024 by Elladavyson
1
step1Level 1 ridge with logistic regression... -on phenotype 1 (pheno)...Killed
#581 opened Dec 11, 2024 by abcdef-l
1
Regenie step 1: Low variance error
#580 opened Dec 11, 2024 by chirrie
2
Regenie 4.0 much slower than earlier version at step2
#577 opened Dec 9, 2024 by edg1983
2
Regenie v3.5 is much slower when given 16 threads than when given 8
#576 opened Dec 4, 2024 by Jeremy37
1
gene base testing
#575 opened Nov 30, 2024 by xx3411
4
Weird Q-Q plot in regenie while obtaining binary trait GWAS
#574 opened Nov 28, 2024 by swathihg
3
Questions about the annotation input file
#573 opened Nov 26, 2024 by MaryamEO
2
SNP with low variance
#568 opened Nov 15, 2024 by lanjiangVUMC
3
REGENIE v4.0 and survival analysis, what comes next?
#567 opened Nov 13, 2024 by Ojami
libraries / linux issues with v3.6.gz_x86_64_ubuntu20_mkl
#564 opened Oct 27, 2024 by dvh13
1
Speed up ideas
#562 opened Oct 14, 2024 by zx8754
5
N-variants in the set and avoid sets with n< x variants enhancement New feature or request
#561 opened Oct 10, 2024 by jerome-f
Missing variants in REGENIE Gene burden test
#557 opened Sep 27, 2024 by Liyincly01
1
majority of tests ignored due to low MAC
#550 opened Sep 2, 2024 by Xuemin-Wang
2
Add option to skip running the singleton mask enhancement New feature or request
#544 opened Aug 5, 2024 by dvg-p4
1
SKAT problems
#539 opened Jul 22, 2024 by kw8
5
Second low variance error after filtering --mac 100 with Plink
#537 opened Jul 9, 2024 by jdarias93
1
interaction test model
#536 opened Jul 5, 2024 by Zzaroro
segmentation fault using LD computation
#533 opened Jun 27, 2024 by josemq
7
Document output format with --htp flag for region-based regenie step 2 documentation Improvements or additions to documentation
#524 opened May 13, 2024 by dvg-p4
@joellembatchou
5
ProTip! Find all open issues with in progress development work with linked:pr.