1.0.2-rc1

Updates:

• groovy to 2.5.13, update gngs
• gradle to 5.2.1
• htsjdk to 2.23.0

Fixes:

• fix r1/r2 order not preserved in output
• fix bazam entrypoint broken by upgrade to gngs
• fix build broken by graxxia upgrade
• fix potential race condition / hang
• workaround to prevent possible bad ordering of fastq when written separately as r1 / r2

Bazam 1.0.1

Changes:

• Fixed pairs where one R1 is unmapped and R2 is aligned to positive strand being output with
  one read incorrectly reverse complemented

Bazam 1.0

Bazam 1.0

The first release of Bazam.